C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane 7 superfamily member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529601 TM7SF2-004 ENSG00000149809 9606 + 11:65111878-65116384 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyOvaryENST00000529601
Transcript ID Brain Heart Kidney Ovary
ENST00000529601 9.032±0.00 3.862±0.00 21.678±0.00 5.733±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O4 CIL_0005O4_0002 CGP 11:65089324-65116384
CIL_0002IZ CIL_0002IZ_0002 CGP 11:65111845-65117708

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161090 Tm7sf2-013 nonsense_mediated_decay Mus_musculus 0 1245
ENSMUST00000025713 Tm7sf2-001 protein_coding Mus_musculus 0 1020
ENSMUST00000113543 Tm7sf2-006 protein_coding Mus_musculus 0 891
ENSMUST00000161718 Tm7sf2-010 protein_coding Mus_musculus 0 654
ENSMUST00000159084 Tm7sf2-007 protein_coding Mus_musculus 0 604
ENSMUST00000162575 Tm7sf2-014 protein_coding Mus_musculus 0 446
ENSMUST00000162810 Tm7sf2-009 protein_coding Mus_musculus 0 418
ENSMUST00000161528 Tm7sf2-004 protein_coding Mus_musculus 0 230
ENSMUST00000160354 Tm7sf2-008 retained_intron Mus_musculus 0 224
ENSMUST00000159836 Tm7sf2-011 retained_intron Mus_musculus 9.80909e-45 185
ENSMUST00000162549 Tm7sf2-003 retained_intron Mus_musculus 9.80909e-45 185
ENSMUST00000160028 Tm7sf2-002 protein_coding Mus_musculus 6e-32 143

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