| Transcript ID | Breast | Muscle | Placenta |
|---|---|---|---|
| ENSMUST00000025723 | 5.380±0.00 | 1.811±0.00 | 18.885±0.88 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synovial apoptosis inhibitor 1, synoviolin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000025723  |
Syvn1-004 |
ENSMUSG00000024807 |
10090 | + |
19:6047104-6053709  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W1 | CIL_0008W1_0002 | VISTA | 19:5510095-6112698 |
| CIL_0002MM | CIL_0002MM_0002 | CGP | 19:6046576-6057751 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000151 | ISO | ubiquitin ligase complex |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0004842 | ISO | ubiquitin-protein transferase activity |
| GO:0005783 | ISO | endoplasmic reticulum |
| GO:0006986 | ISO | response to unfolded protein |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016567 | ISO | protein ubiquitination |
| GO:1902236 | IMP | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000279242
|
MRPL49-001 | protein_coding | Homo_sapiens | 2e-32 | 145 |
|
ENST00000294256
|
SYVN1-002 | protein_coding | Homo_sapiens | 0 | 1938 |
|
ENST00000307289
|
SYVN1-011 | protein_coding | Homo_sapiens | 0 | 2547 |
|
ENST00000377190
|
SYVN1-001 | protein_coding | Homo_sapiens | 0 | 1930 |
|
ENST00000449943
|
SYVN1-003 | retained_intron | Homo_sapiens | 0 | 983 |
|
ENST00000524482
|
MRPL49-002 | processed_transcript | Homo_sapiens | 1e-25 | 122 |
|
ENST00000525874
|
SYVN1-008 | retained_intron | Homo_sapiens | 0 | 350 |
|
ENST00000526060
|
SYVN1-004 | protein_coding | Homo_sapiens | 0 | 1938 |
|
ENST00000526121
|
SYVN1-014 | processed_transcript | Homo_sapiens | 0 | 621 |
|
ENST00000526319
|
MRPL49-004 | nonsense_mediated_decay | Homo_sapiens | 1e-29 | 135 |
|
ENST00000527142
|
SYVN1-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 571 |
|
ENST00000527765
|
SYVN1-010 | processed_transcript | Homo_sapiens | 0 | 436 |
|
ENST00000528487
|
SYVN1-005 | protein_coding | Homo_sapiens | 0 | 359 |
|
ENST00000529207
|
SYVN1-006 | retained_intron | Homo_sapiens | 0 | 350 |
|
ENST00000530451
|
SYVN1-012 | retained_intron | Homo_sapiens | 0 | 259 |
|
ENST00000531018
|
SYVN1-007 | protein_coding | Homo_sapiens | 0 | 569 |
|
ENST00000532671
|
MRPL49-003 | retained_intron | Homo_sapiens | 2e-29 | 135 |
|
ENST00000532771
|
SYVN1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 532 |
|
ENST00000533685
|
SYVN1-013 | retained_intron | Homo_sapiens | 0 | 204 |
