C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease H2, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308418 RNASEH2C-001 ENSG00000172922 9606 - 11:65717673-65720947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000308418
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000308418 10.773±0.00 1.431±0.00 6.931±3.59 4.756±3.90 6.972±0.00 2.150±1.02 7.403±0.00 2.071±0.84 7.076±0.00 13.435±9.06 6.963±1.94 13.407±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006401 IDA RNA catabolic process
GO:0032299 IDA ribonuclease H2 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025864 Rnaseh2c-001 protein_coding Mus_musculus 0 331
ENSMUST00000113641 Kat5-201 protein_coding Mus_musculus 0 305
ENSMUST00000155639 Rnaseh2c-004 retained_intron Mus_musculus 0 206
ENSMUST00000136226 Rnaseh2c-002 protein_coding Mus_musculus 3e-32 145

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