C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease H2, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531596 RNASEH2C-006 ENSG00000172922 9606 - 11:65718767-65720739 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleENST00000531596
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle
ENST00000531596 12.869±0.00 6.059±0.00 2.900±0.00 14.326±0.00 9.655±0.00 10.901±7.74 3.954±1.83 15.595±0.00 11.111±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025864 Rnaseh2c-001 protein_coding Mus_musculus 0 254
ENSMUST00000155639 Rnaseh2c-004 retained_intron Mus_musculus 0 206
ENSMUST00000113641 Kat5-201 protein_coding Mus_musculus 1e-36 158
ENSMUST00000136226 Rnaseh2c-002 protein_coding Mus_musculus 1e-32 145

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