C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tectonic family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025981 Tctn3-001 ENSMUSG00000025008 10090 - 19:40596446-40612233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025981 4.181±1.03 3.751±1.42 3.925±0.77 5.780±1.11 2.424±1.20 2.437±0.37 1.731±0.41 3.171±0.71 0.814±0.53 3.703±0.87 0.786±0.25 9.820±1.53 3.857±1.07 7.360±4.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067D CIL_00067D_0002 CGP 19:40550257-40612233
CIL_00067C CIL_00067C_0002 CGP 19:40596446-40741602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006915 IEA apoptotic process
GO:0007224 IEA smoothened signaling pathway
GO:0016021 IEA integral component of membrane
GO:0060271 IMP cilium morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265993 TCTN3-001 protein_coding Homo_sapiens 0 1426
ENST00000371209 TCTN3-007 protein_coding Homo_sapiens 0 854
ENST00000371217 TCTN3-009 protein_coding Homo_sapiens 0 1426
ENST00000430368 TCTN3-010 protein_coding Homo_sapiens 0 632
ENST00000478245 TCTN3-006 retained_intron Homo_sapiens 0 257
ENST00000497399 TCTN3-005 retained_intron Homo_sapiens 0 252
ENST00000614499 TCTN3-201 protein_coding Homo_sapiens 0 1426

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