C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basonuclin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026096 Bnc1-201 ENSMUSG00000025105 10090 - 7:81966672-81992299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026096
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026096 1.109±0.64 0.062±0.05 0.410±0.06 0.089±0.09 0.106±0.03 0.199±0.11 0.313±0.04 0.043±0.02 0.119±0.10 1.063±0.33 0.008±0.00 2.141±0.83 0.569±0.47 0.443±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037Q CIL_00037Q_0002 CGP 7:81881251-81992299
CIL_0006KR CIL_0006KR_0002 CGP 7:81966672-82307419

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006356 IMP regulation of transcription from RNA polymerase I promoter
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0042060 IMP wound healing
GO:0046872 IEA metal ion binding
GO:0050679 IMP positive regulation of epithelial cell proliferation
GO:0051276 IMP chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109108 BNC1-201 protein_coding Danio_rerio 0 237
ENST00000345382 BNC1-001 protein_coding Homo_sapiens 0 3559
ENST00000569704 BNC1-003 protein_coding Homo_sapiens 0 3212
ENST00000618086 BNC1-201 protein_coding Homo_sapiens 0 3555

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