C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026150 Arhgap19-001 ENSMUSG00000025154 10090 - 19:41766588-41802047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026150 1.057±0.50 1.128±0.00 0.682±0.21 2.108±1.39 1.192±0.24 0.803±0.55 0.570±0.25 0.593±0.13 13.490±8.62 1.364±0.03 1.674±0.40 3.438±1.80 3.975±2.62 20.098±5.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0002 VISTA 19:41258217-41859329
CIL_0003F3 CIL_0003F3_0002 CGP 19:41600257-41802084

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358308 ARHGAP19-201 protein_coding Homo_sapiens 0 1037
ENST00000358531 ARHGAP19-003 protein_coding Homo_sapiens 0 1748
ENST00000371027 ARHGAP19-002 protein_coding Homo_sapiens 0 1692
ENST00000479633 ARHGAP19-SLIT1-001 nonsense_mediated_decay Homo_sapiens 0 1624
ENST00000492211 ARHGAP19-004 nonsense_mediated_decay Homo_sapiens 0 1020
ENST00000493068 ARHGAP19-007 retained_intron Homo_sapiens 0 412

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