C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ARHGAP19-SLIT1 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479633 ARHGAP19-SLIT1-001 ENSG00000269891 9606 - 10:97153046-97292637 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungENST00000479633
Transcript ID Bladder Heart Lung
ENST00000479633 1.008±0.00 0.178±0.00 0.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0001 VISTA 10:96654859-97255972
CIL_0003F3 CIL_0003F3_0001 CGP 10:96998038-97292637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026150 Arhgap19-001 protein_coding Mus_musculus 0 1624
ENSMUST00000163265 Arhgap19-201 protein_coding Mus_musculus 0 1543
ENSMUST00000177495 Arhgap19-002 protein_coding Mus_musculus 0 1219

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