C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apurinic/apyrimidinic endonuclease 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026303 Apex2-201 ENSMUSG00000025269 10090 - X:150571508-150588149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyOvaryPlacentaENSMUST00000026303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Ovary Placenta
ENSMUST00000026303 6.181±0.88 4.794±1.23 2.253±0.66 5.665±0.00 5.109±1.02 3.282±0.21 6.182±0.78 5.284±1.40 9.630±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YC CIL_0000YC_0002 CGP X:150519519-150589868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IBA DNA catabolic process, endonucleolytic
GO:0000738 IBA DNA catabolic process, exonucleolytic
GO:0003677 IEA DNA binding
GO:0003906 IBA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006284 IBA base-excision repair
GO:0008270 IEA zinc ion binding
GO:0008311 IBA double-stranded DNA 3'-5' exodeoxyribonuclease activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374987 APEX2-001 protein_coding Homo_sapiens 0 1469
ENST00000471758 APEX2-002 processed_transcript Homo_sapiens 0 446

Loading