C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169188-ENSG00000158578 CGP 9606 X:55000357-55031064
GeneTranscriptPositionBiotype
ENSG00000158578 (ALAS2)
aminolevulinate, delta-, synthase 2
ENST00000330807 (ALAS2-006) 55009055-55031064 protein_coding
ENST00000335854 (ALAS2-008) 55009089-55030977 protein_coding
ENST00000396198 (ALAS2-007) 55009055-55030977 protein_coding
ENST00000455688 (ALAS2-004) 55020334-55030977 protein_coding
ENST00000463868 (ALAS2-002) 55017560-55030977 processed_transcript
ENST00000477869 (ALAS2-005) 55017651-55030977 processed_transcript
ENST00000493869 (ALAS2-003) 55020425-55030977 processed_transcript
ENST00000498636 (ALAS2-001) 55009113-55020433 processed_transcript
ENSG00000169188 (APEX2)
APEX nuclease (apurinic/apyrimidinic endonuclease) 2
ENST00000374987 (APEX2-001) 55000357-55009057 protein_coding
ENST00000471758 (APEX2-002) 55000393-55006757 processed_transcript
CIL_0000YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025269-ENSMUSG00000025269 CGP 10090 X:150519519-150589868
GeneTranscriptPositionBiotype
ENSMUSG00000025269 (Apex2)
apurinic/apyrimidinic endonuclease 2
ENSMUST00000026303 (Apex2-201) 150571508-150588149 protein_coding
ENSMUST00000112719 (Apex2-005) 150584137-150588081 protein_coding
ENSMUST00000112720 (Apex2-001) 150568862-150589844 protein_coding
ENSMUST00000112721 (Apex2-004) 150571508-150588096 protein_coding
ENSMUST00000112725 (Apex2-002) 150519519-150589844 protein_coding
ENSMUST00000112727 (Apex2-003) 150520352-150588082 protein_coding
ENSMUST00000124521 (Apex2-007) 150571508-150589868 processed_transcript
ENSMUST00000138958 (Apex2-008) 150572459-150586207 processed_transcript
ENSMUST00000140207 (Apex2-009) 150572549-150588071 protein_coding
ENSMUST00000152332 (Apex2-006) 150571507-150588085 retained_intron
ENSMUSG00000025270 (Alas2)
aminolevulinic acid synthase 2, erythroid
ENSMUST00000066337 (Alas2-001) 150547375-150570638 protein_coding
ENSMUST00000112715 (Alas2-002) 150547459-150570622 protein_coding
ENSMUST00000134670 (Alas2-003) 150554037-150557663 retained_intron
ENSMUST00000142474 (Alas2-004) 150566390-150570622 processed_transcript
ENSMUSG00000025271 (Pfkfb1)
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
ENSMUST00000080884 (Pfkfb1-001) 150589921-150643878 protein_coding
ENSMUST00000112713 (Pfkfb1-002) 150594478-150643878 protein_coding
ENSMUST00000124381 (Pfkfb1-005) 150588256-150612932 processed_transcript
ENSMUST00000142848 (Pfkfb1-006) 150613934-150624706 processed_transcript
ENSMUST00000150783 (Pfkfb1-003) 150594610-150643857 retained_intron
ENSMUST00000153221 (Pfkfb1-004) 150588229-150625183 protein_coding
ENSMUST00000154528 (Pfkfb1-007) 150625341-150641977 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YC_0001ENSG00000158578ENST00000330807ENST00000335854ENST00000396198ENST00000455688ENST00000463868ENST00000477869ENST00000493869ENST00000498636ENSG00000169188ENST00000374987ENST00000471758CIL_0000YC_0002ENSMUSG00000025269ENSMUST00000026303ENSMUST00000112719ENSMUST00000112720ENSMUST00000112721ENSMUST00000112725ENSMUST00000112727ENSMUST00000124521ENSMUST00000138958ENSMUST00000140207ENSMUST00000152332ENSMUSG00000025270ENSMUST00000066337ENSMUST00000112715ENSMUST00000134670ENSMUST00000142474ENSMUSG00000025271ENSMUST00000080884ENSMUST00000112713ENSMUST00000124381ENSMUST00000142848ENSMUST00000150783ENSMUST00000153221ENSMUST00000154528
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YC_0001ENSG00000158578ENST00000330807ENST00000335854ENST00000396198ENST00000455688ENST00000498636ENSG00000169188ENST00000374987ENST00000471758CIL_0000YC_0002ENSMUSG00000025269ENSMUST00000026303ENSMUST00000112720ENSMUST00000112725ENSMUST00000138958ENSMUST00000140207ENSMUST00000152332ENSMUSG00000025270ENSMUST00000066337ENSMUST00000112715ENSMUSG00000025271ENSMUST00000080884ENSMUST00000112713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158578 ENST00000330807 1.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.684±0.00 N/A 0.882±0.00 9.192±0.87 2.161±0.00
ENST00000335854 2.864±0.00 N/A N/A N/A N/A 7.369±0.00 N/A N/A N/A 23.260±0.00 N/A N/A 7.622±2.00 2.286±0.00
ENST00000396198 N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.972±0.00 N/A
ENST00000455688 N/A N/A N/A N/A 1.129±0.00 N/A 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498636 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.434±0.00 N/A N/A 10.940±0.00 N/A
ENSG00000169188 ENST00000374987 4.800±0.00 4.801±0.00 0.261±0.00 1.271±0.75 3.907±0.00 2.571±0.00 2.521±0.00 4.949±0.00 2.116±1.35 2.117±1.61 1.524±1.22 4.821±3.04 5.654±1.67 2.156±1.11
ENST00000471758 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00 2.383±0.00 6.080±0.00 N/A 1.005±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025269 ENSMUST00000026303 6.181±0.88 4.794±1.23 2.253±0.66 5.665±0.00 5.109±1.02 3.282±0.21 N/A 6.182±0.78 N/A N/A N/A 5.284±1.40 9.630±0.00 N/A
ENSMUST00000112719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112720 N/A N/A 0.520±0.09 0.790±0.67 N/A N/A N/A N/A N/A N/A N/A 0.504±0.04 N/A N/A
ENSMUST00000112721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112725 N/A N/A 0.454±0.00 N/A N/A 0.585±0.00 N/A N/A N/A N/A N/A 0.778±0.08 N/A N/A
ENSMUST00000112727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.879±1.00 N/A N/A
ENSMUST00000140207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.992±0.00 N/A N/A
ENSMUST00000152332 N/A N/A N/A 2.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025270 ENSMUST00000066337 3.979±0.78 N/A 0.798±0.00 5.308±4.14 3.587±0.00 1.712±0.01 66.992±49.56 6.922±1.24 201.144±214.02 22.777±8.14 N/A 2.400±0.67 34.434±13.22 5.967±2.50
ENSMUST00000112715 N/A 2.470±0.19 N/A N/A N/A 2.238±1.37 73.926±4.29 5.298±1.05 89.774±94.57 21.422±11.66 N/A 2.796±0.66 22.778±14.00 4.492±1.22
ENSMUST00000134670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025271 ENSMUST00000080884 26.742±13.14 7.181±4.73 1.800±0.73 N/A 22.905±7.13 1.634±0.54 N/A N/A N/A N/A 16.971±1.65 5.302±1.04 13.649±1.58 2.801±0.06
ENSMUST00000112713 3.867±0.00 3.481±0.00 N/A N/A 8.695±1.98 N/A 7.710±0.29 N/A 34.203±35.77 N/A 8.038±2.42 3.778±0.00 N/A N/A
ENSMUST00000124381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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