C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026445 Fscn2-001 ENSMUSG00000025380 10090 + 11:120361534-120368168 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026445 0.031±0.02 0.134±0.04 0.070±0.02 0.157±0.09 0.068±0.02 0.057±0.01 0.060±0.02 0.086±0.05 0.026±0.01 0.107±0.10 0.646±0.16 0.226±0.10 0.108±0.03 0.259±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BP CIL_0003BP_0002 CGP 11:120361534-120378764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005737 IEA cytoplasm
GO:0015629 IDA actin cytoskeleton
GO:0030036 ISS actin cytoskeleton organization
GO:0030674 IEA protein binding, bridging
GO:0032420 IDA stereocilium
GO:0042462 IMP eye photoreceptor cell development
GO:0051015 ISS actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334850 FSCN2-003 protein_coding Homo_sapiens 0 1275
ENST00000417245 FSCN2-001 protein_coding Homo_sapiens 0 1589

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