C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003BP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186765-ENSG00000185504 CGP 9606 17:81528396-81553961
GeneTranscriptPositionBiotype
ENSG00000185504 (C17orf70)
chromosome 17 open reading frame 70 		ENST00000327787 (C17orf70-001) 81539885-81552377 protein_coding
ENST00000425898 (C17orf70-004) 81539886-81548498 protein_coding
ENST00000443656 (C17orf70-002) 81539885-81552376 nonsense_mediated_decay
ENST00000536161 (C17orf70-006) 81550797-81553961 protein_coding
ENST00000541246 (C17orf70-008) 81549254-81553109 protein_coding
ENST00000544302 (C17orf70-007) 81550292-81553127 protein_coding
ENST00000545865 (C17orf70-005) 81544004-81547203 nonsense_mediated_decay
ENSG00000186765 (FSCN2)
fascin actin-bundling protein 2, retinal 		ENST00000334850 (FSCN2-003) 81528532-81537080 protein_coding
ENST00000417245 (FSCN2-001) 81528396-81537130 protein_coding
ENST00000527221 (FSCN2-002) 81536146-81536956 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0003BP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025380-ENSMUSG00000025384 CGP 10090 11:120361534-120378764
GeneTranscriptPositionBiotype
ENSMUSG00000025380 (Fscn2)
fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 		ENSMUST00000026445 (Fscn2-001) 120361534-120368168 protein_coding
ENSMUST00000130476 (Fscn2-003) 120366713-120367820 processed_transcript
ENSMUST00000152556 (Fscn2-002) 120366542-120367948 processed_transcript
ENSMUSG00000025384 (2310003H01Rik)
RIKEN cDNA 2310003H01 gene 		ENSMUST00000026448 (2310003H01Rik-001) 120369562-120378764 protein_coding
ENSMUST00000129203 (2310003H01Rik-008) 120369881-120370888 retained_intron
ENSMUST00000134771 (2310003H01Rik-007) 120372971-120374167 processed_transcript
ENSMUST00000135635 (2310003H01Rik-006) 120369055-120378735 retained_intron
ENSMUST00000148520 (2310003H01Rik-002) 120376170-120378709 processed_transcript
ENSMUST00000152346 (2310003H01Rik-004) 120377323-120378735 processed_transcript
ENSMUST00000153015 (2310003H01Rik-005) 120376986-120378474 processed_transcript
ENSMUST00000154826 (2310003H01Rik-003) 120373026-120378736 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BP_0001ENSG00000185504ENST00000327787ENST00000425898ENST00000443656ENST00000536161ENST00000541246ENST00000544302ENST00000545865ENSG00000186765ENST00000334850ENST00000417245ENST00000527221CIL_0003BP_0002ENSMUSG00000025380ENSMUST00000026445ENSMUST00000130476ENSMUST00000152556ENSMUSG00000025384ENSMUST00000026448ENSMUST00000129203ENSMUST00000134771ENSMUST00000135635ENSMUST00000148520ENSMUST00000152346ENSMUST00000153015ENSMUST00000154826
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BP_0001ENSG00000185504ENST00000327787ENST00000425898ENST00000443656ENST00000541246ENST00000545865ENSG00000186765ENST00000334850ENST00000417245ENST00000527221CIL_0003BP_0002ENSMUSG00000025380ENSMUST00000026445ENSMUST00000130476ENSMUST00000152556ENSMUSG00000025384ENSMUST00000026448ENSMUST00000135635
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185504 ENST00000327787 2.024±0.00 N/A 0.277±0.00 0.709±0.28 0.660±0.52 2.057±0.00 2.203±0.00 4.698±0.00 1.952±1.80 0.711±0.30 4.567±0.00 5.249±1.97 2.900±0.96 1.840±0.41
ENST00000425898 1.831±0.00 7.199±0.00 N/A 1.266±0.00 1.403±1.03 0.890±0.45 N/A 1.377±0.00 0.441±0.23 2.383±0.00 N/A 3.138±1.50 1.689±0.19 2.176±0.12
ENST00000443656 2.174±0.00 3.232±0.00 0.332±0.00 0.713±0.00 1.177±1.01 0.640±0.00 1.212±0.00 0.970±0.00 N/A N/A N/A 2.209±0.95 0.709±0.00 N/A
ENST00000536161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A N/A N/A
ENST00000544302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545865 N/A N/A N/A N/A N/A N/A N/A 0.584±0.00 N/A N/A 0.413±0.00 N/A N/A N/A
ENSG00000186765 ENST00000334850 N/A N/A 0.626±0.00 0.185±0.00 0.091±0.05 N/A 0.100±0.00 0.564±0.00 0.536±0.00 0.066±0.00 N/A 0.599±0.58 0.161±0.00 N/A
ENST00000417245 N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 0.071±0.00 0.302±0.00 N/A 0.362±0.21 0.043±0.00 0.212±0.04
ENST00000527221 0.043±0.00 N/A N/A 0.120±0.00 0.072±0.00 0.145±0.00 N/A N/A N/A N/A N/A 0.240±0.00 N/A 0.187±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025380 ENSMUST00000026445 0.031±0.02 0.134±0.04 0.070±0.02 0.157±0.09 0.068±0.02 0.057±0.01 0.060±0.02 0.086±0.05 0.026±0.01 0.107±0.10 0.646±0.16 0.226±0.10 0.108±0.03 0.259±0.18
ENSMUST00000130476 0.080±0.03 N/A 0.061±0.00 0.176±0.03 0.140±0.01 0.096±0.00 0.114±0.07 0.048±0.00 0.034±0.02 0.160±0.03 N/A 0.204±0.05 0.147±0.07 0.040±0.00
ENSMUST00000152556 0.064±0.00 N/A N/A 0.142±0.04 N/A 0.147±0.05 0.153±0.05 0.157±0.05 0.114±0.04 N/A 0.684±0.00 0.206±0.07 0.303±0.28 1.068±0.08
ENSMUSG00000025384 ENSMUST00000026448 11.175±3.80 40.280±2.21 7.618±0.34 25.583±15.84 12.725±5.45 16.577±2.39 7.073±0.37 9.460±1.25 3.717±0.64 15.675±1.19 4.117±0.82 21.819±10.46 3.992±0.62 16.748±6.67
ENSMUST00000129203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135635 2.524±0.00 N/A 1.227±0.09 3.192±1.81 2.458±0.01 N/A 0.918±0.05 1.322±0.26 0.617±0.15 N/A 0.964±0.36 2.764±1.34 1.029±0.52 3.580±1.40
ENSMUST00000148520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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