C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026479 Dctn2-201 ENSMUSG00000025410 10090 + 10:127266262-127281959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026479 98.896±20.69 106.501±13.25 97.596±3.42 192.530±30.74 72.231±11.98 79.386±6.89 51.742±4.29 74.062±3.84 57.040±13.13 64.966±1.96 48.210±4.65 108.935±10.12 96.992±33.18 202.374±30.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EM CIL_0007EM_0002 CGP 10:127225696-127281959
CIL_0006M4 CIL_0006M4_0002 CGP 10:127266262-127289018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005813 IBA centrosome
GO:0005869 IBA dynactin complex
GO:0005874 IEA microtubule
GO:0007052 IBA mitotic spindle organization
GO:0007067 IEA mitotic nuclear division
GO:0008152 IEA metabolic process
GO:0008283 IEA cell proliferation
GO:0016020 IEA membrane
GO:0030286 IEA dynein complex
GO:0030426 IDA growth cone
GO:0030507 ISO spectrin binding
GO:0031982 ISS vesicle
GO:0032402 IMP melanosome transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434715 DCTN2-026 protein_coding Homo_sapiens 0 1578
ENST00000543672 DCTN2-201 protein_coding Homo_sapiens 0 1618
ENST00000546559 DCTN2-009 processed_transcript Homo_sapiens 0 291
ENST00000546670 DCTN2-014 protein_coding Homo_sapiens 0 619
ENST00000546758 DCTN2-023 protein_coding Homo_sapiens 0 562
ENST00000546965 DCTN2-012 processed_transcript Homo_sapiens 0 656
ENST00000547345 DCTN2-013 retained_intron Homo_sapiens 0 625
ENST00000547480 DCTN2-008 retained_intron Homo_sapiens 0 431
ENST00000548249 DCTN2-001 protein_coding Homo_sapiens 0 1753
ENST00000548736 DCTN2-020 retained_intron Homo_sapiens 0.0000000004 69
ENST00000548949 DCTN2-017 processed_transcript Homo_sapiens 0 344
ENST00000549394 DCTN2-006 nonsense_mediated_decay Homo_sapiens 0 1395
ENST00000549712 DCTN2-010 processed_transcript Homo_sapiens 0 235
ENST00000550086 DCTN2-018 protein_coding Homo_sapiens 0 346
ENST00000550201 DCTN2-004 nonsense_mediated_decay Homo_sapiens 0 1266
ENST00000550750 DCTN2-007 protein_coding Homo_sapiens 0 512
ENST00000550954 DCTN2-025 protein_coding Homo_sapiens 0 880
ENST00000550988 DCTN2-024 retained_intron Homo_sapiens 0 215
ENST00000551142 DCTN2-019 retained_intron Homo_sapiens 0 239
ENST00000551400 DCTN2-011 processed_transcript Homo_sapiens 0 339
ENST00000551611 DCTN2-016 processed_transcript Homo_sapiens 0 527
ENST00000551872 DCTN2-021 retained_intron Homo_sapiens 0 305
ENST00000552390 DCTN2-022 retained_intron Homo_sapiens 0 562

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