C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007EM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059818-ENSDARG00000031388 CGP 7955 6:58674850-58770303
GeneTranscriptPositionBiotype
ENSDARG00000031388 (dctn2)
dynactin 2 (p50)
ENSDART00000042595 (dctn2-201) 58734845-58770298 protein_coding
ENSDART00000103144 (dctn2-202) 58734845-58770298 protein_coding
ENSDART00000144842 (dctn2-001) 58734796-58770303 protein_coding
ENSDARG00000059818 (kif5ab)
kinesin family member 5A, b
ENSDART00000090634 (kif5ab-001) 58674850-58731039 protein_coding
ENSDARG00000084873 (5S_rRNA)
5S ribosomal RNA
ENSDART00000120273 (5S_rRNA.874-201) 58696524-58696638 rRNA
CIL_0007EM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074657-ENSMUSG00000025410 CGP 10090 10:127225696-127281959
GeneTranscriptPositionBiotype
ENSMUSG00000025409 (Mbd6)
methyl-CpG binding domain protein 6
ENSMUST00000026476 (Mbd6-001) 127281956-127288890 protein_coding
ENSMUST00000119078 (Mbd6-002) 127281956-127289018 protein_coding
ENSMUST00000126243 (Mbd6-007) 127281956-127285900 nonsense_mediated_decay
ENSMUST00000136169 (Mbd6-005) 127281956-127283668 nonsense_mediated_decay
ENSMUST00000154851 (Mbd6-004) 127282676-127284358 protein_coding
ENSMUST00000156208 (Mbd6-003) 127286568-127288853 protein_coding
ENSMUST00000172567 (Mbd6-008) 127283526-127284371 protein_coding
ENSMUSG00000025410 (Dctn2)
dynactin 2
ENSMUST00000026479 (Dctn2-201) 127266262-127281959 protein_coding
ENSMUSG00000074657 (Kif5a)
kinesin family member 5A
ENSMUST00000099172 (Kif5a-201) 127225696-127263363 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EM_0001ENSDARG00000031388ENSDART00000042595ENSDART00000103144ENSDART00000144842ENSDARG00000059818ENSDART00000090634ENSDARG00000084873ENSDART00000120273CIL_0007EM_0002ENSMUSG00000025409ENSMUST00000026476ENSMUST00000119078ENSMUST00000126243ENSMUST00000136169ENSMUST00000154851ENSMUST00000156208ENSMUST00000172567ENSMUSG00000025410ENSMUST00000026479ENSMUSG00000074657ENSMUST00000099172
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EM_0001ENSDARG00000031388ENSDART00000042595ENSDART00000103144ENSDART00000144842ENSDARG00000059818ENSDART00000090634ENSDARG00000084873ENSDART00000120273CIL_0007EM_0002ENSMUSG00000025409ENSMUST00000026476ENSMUST00000119078ENSMUST00000126243ENSMUSG00000025410ENSMUST00000026479ENSMUSG00000074657ENSMUST00000099172
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031388 ENSDART00000042595 N/A N/A N/A 30.542±9.13 N/A N/A 12.991±7.07 12.207±0.00 2.241±0.00 N/A 9.360±0.00 N/A N/A N/A
ENSDART00000103144 N/A N/A N/A N/A N/A N/A 7.268±0.00 11.561±0.96 N/A N/A N/A N/A N/A N/A
ENSDART00000144842 N/A N/A N/A 34.463±0.00 N/A N/A 15.582±4.15 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059818 ENSDART00000090634 N/A N/A N/A 6.957±6.13 N/A N/A 0.039±0.03 0.138±0.00 0.027±0.00 N/A 0.495±0.00 N/A N/A N/A
ENSDARG00000084873 ENSDART00000120273 N/A N/A N/A 95.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025409 ENSMUST00000026476 5.207±0.15 7.253±1.20 5.668±0.00 N/A 5.245±1.06 6.474±1.35 3.075±0.75 4.898±0.23 3.063±0.49 6.499±0.68 N/A 6.991±1.35 14.335±1.42 15.893±1.15
ENSMUST00000119078 4.301±0.27 11.636±2.15 15.486±0.00 9.068±1.77 6.932±2.36 7.328±2.30 2.387±0.00 4.055±0.00 4.105±1.42 6.486±1.32 N/A 7.201±1.38 11.573±5.10 8.882±0.00
ENSMUST00000126243 N/A N/A N/A N/A 3.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025410 ENSMUST00000026479 98.896±20.69 106.501±13.25 97.596±3.42 192.530±30.74 72.231±11.98 79.386±6.89 51.742±4.29 74.062±3.84 57.040±13.13 64.966±1.96 48.210±4.65 108.935±10.12 96.992±33.18 202.374±30.27
ENSMUSG00000074657 ENSMUST00000099172 1.469±0.51 3.859±2.80 2.655±0.02 201.404±191.14 0.975±0.43 1.311±0.42 0.309±0.03 0.874±0.38 0.598±0.58 0.295±0.13 0.085±0.04 1.816±0.82 1.774±1.72 1.221±0.44

Loading