C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006M4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031388-ENSDARG00000086980 CGP 7955 6:58734796-58813043
GeneTranscriptPositionBiotype
ENSDARG00000031388 (dctn2)
dynactin 2 (p50)
ENSDART00000042595 (dctn2-201) 58734845-58770298 protein_coding
ENSDART00000103144 (dctn2-202) 58734845-58770298 protein_coding
ENSDART00000144842 (dctn2-001) 58734796-58770303 protein_coding
ENSDARG00000086980 (mbd6)
methyl-CpG binding domain protein 6
ENSDART00000122003 (mbd6-201) 58770954-58804193 protein_coding
ENSDART00000156662 (mbd6-001) 58774241-58813043 protein_coding
CIL_0006M4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025410-ENSMUSG00000025409 CGP 10090 10:127266262-127289018
GeneTranscriptPositionBiotype
ENSMUSG00000025409 (Mbd6)
methyl-CpG binding domain protein 6
ENSMUST00000026476 (Mbd6-001) 127281956-127288890 protein_coding
ENSMUST00000119078 (Mbd6-002) 127281956-127289018 protein_coding
ENSMUST00000126243 (Mbd6-007) 127281956-127285900 nonsense_mediated_decay
ENSMUST00000136169 (Mbd6-005) 127281956-127283668 nonsense_mediated_decay
ENSMUST00000154851 (Mbd6-004) 127282676-127284358 protein_coding
ENSMUST00000156208 (Mbd6-003) 127286568-127288853 protein_coding
ENSMUST00000172567 (Mbd6-008) 127283526-127284371 protein_coding
ENSMUSG00000025410 (Dctn2)
dynactin 2
ENSMUST00000026479 (Dctn2-201) 127266262-127281959 protein_coding
ENSMUSG00000092593 (Gm20492)
predicted gene 20492
ENSMUST00000172591 (Gm20492-001) 127288514-127289681 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006M4_0001ENSDARG00000031388ENSDART00000042595ENSDART00000103144ENSDART00000144842ENSDARG00000086980ENSDART00000122003ENSDART00000156662CIL_0006M4_0002ENSMUSG00000025409ENSMUST00000026476ENSMUST00000119078ENSMUST00000126243ENSMUST00000136169ENSMUST00000154851ENSMUST00000156208ENSMUST00000172567ENSMUSG00000025410ENSMUST00000026479ENSMUSG00000092593ENSMUST00000172591
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006M4_0001ENSDARG00000031388ENSDART00000042595ENSDART00000103144ENSDART00000144842ENSDARG00000086980ENSDART00000122003ENSDART00000156662CIL_0006M4_0002ENSMUSG00000025409ENSMUST00000026476ENSMUST00000119078ENSMUST00000126243ENSMUSG00000025410ENSMUST00000026479ENSMUSG00000092593ENSMUST00000172591
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031388 ENSDART00000042595 N/A N/A N/A 30.542±9.13 N/A N/A 12.991±7.07 12.207±0.00 2.241±0.00 N/A 9.360±0.00 N/A N/A N/A
ENSDART00000103144 N/A N/A N/A N/A N/A N/A 7.268±0.00 11.561±0.96 N/A N/A N/A N/A N/A N/A
ENSDART00000144842 N/A N/A N/A 34.463±0.00 N/A N/A 15.582±4.15 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086980 ENSDART00000122003 N/A N/A N/A 5.151±2.04 N/A N/A 1.121±1.27 0.210±0.06 0.114±0.00 N/A 0.566±0.00 N/A N/A N/A
ENSDART00000156662 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A 0.275±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025409 ENSMUST00000026476 5.207±0.15 7.253±1.20 5.668±0.00 N/A 5.245±1.06 6.474±1.35 3.075±0.75 4.898±0.23 3.063±0.49 6.499±0.68 N/A 6.991±1.35 14.335±1.42 15.893±1.15
ENSMUST00000119078 4.301±0.27 11.636±2.15 15.486±0.00 9.068±1.77 6.932±2.36 7.328±2.30 2.387±0.00 4.055±0.00 4.105±1.42 6.486±1.32 N/A 7.201±1.38 11.573±5.10 8.882±0.00
ENSMUST00000126243 N/A N/A N/A N/A 3.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025410 ENSMUST00000026479 98.896±20.69 106.501±13.25 97.596±3.42 192.530±30.74 72.231±11.98 79.386±6.89 51.742±4.29 74.062±3.84 57.040±13.13 64.966±1.96 48.210±4.65 108.935±10.12 96.992±33.18 202.374±30.27
ENSMUSG00000092593 ENSMUST00000172591 2.788±0.36 0.502±0.02 2.997±0.43 2.516±2.13 2.174±0.60 0.703±0.20 0.391±0.14 1.654±0.43 0.824±0.38 0.715±0.27 0.474±0.19 5.419±3.27 1.338±0.81 4.940±1.37

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