C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026583 Pnpla2-002 ENSMUSG00000025509 10090 + 7:141455206-141460092 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026583
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026583 388.518±205.12 99.277±25.75 28.513±1.17 1.994±0.25 194.235±93.98 19.122±4.55 82.251±19.69 47.639±3.49 3.896±1.83 20.673±1.17 50.252±2.64 34.206±30.74 6.759±4.56 43.808±20.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EM CIL_0003EM_0002 CGP 7:141447370-141460743
CIL_0003EN CIL_0003EN_0002 CGP 7:141455198-141466613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 IDA cytosol
GO:0019433 IMP triglyceride catabolic process
GO:0034389 IMP lipid particle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336615 PNPLA2-001 protein_coding Homo_sapiens 0 1144
ENST00000525250 PNPLA2-002 retained_intron Homo_sapiens 0 627
ENST00000531923 PNPLA2-007 retained_intron Homo_sapiens 0 327
ENST00000617551 PNPLA2-201 protein_coding Homo_sapiens 0 627

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