C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026672 Pde8a-001 ENSMUSG00000025584 10090 + 7:81213596-81334533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026672
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026672 12.756±0.74 7.392±1.97 6.792±0.09 1.903±0.94 7.769±2.27 2.892±0.56 3.735±0.40 15.799±2.38 4.540±2.34 6.630±0.80 2.773±0.34 10.606±2.54 9.473±1.42 35.223±16.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M0 CIL_0000M0_0002 CGP 7:81114799-81334533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system
GO:0004115 IDA 3',5'-cyclic-AMP phosphodiesterase activity
GO:0004871 IEA signal transducer activity
GO:0006198 IEA cAMP catabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310298 PDE8A-001 protein_coding Homo_sapiens 0 2285
ENST00000339708 PDE8A-002 protein_coding Homo_sapiens 0 1500
ENST00000394553 PDE8A-201 protein_coding Homo_sapiens 0 2285
ENST00000478717 PDE8A-003 nonsense_mediated_decay Homo_sapiens 0 1652
ENST00000485596 PDE8A-004 nonsense_mediated_decay Homo_sapiens 0 1648
ENST00000557819 PDE8A-010 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000557954 PDE8A-012 retained_intron Homo_sapiens 0 331
ENST00000557957 PDE8A-005 protein_coding Homo_sapiens 0 2278
ENST00000558543 PDE8A-011 retained_intron Homo_sapiens 0 523
ENST00000559742 PDE8A-006 nonsense_mediated_decay Homo_sapiens 0 1500
ENST00000560789 PDE8A-007 retained_intron Homo_sapiens 0 1500
ENST00000561024 PDE8A-008 retained_intron Homo_sapiens 0 682
ENST00000561105 PDE8A-015 retained_intron Homo_sapiens 4e-25 117

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