C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478717 PDE8A-003 ENSG00000073417 9606 + 15:84981981-85138032 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonOvaryPlacentaENST00000478717
Transcript ID Adrenal Bladder Brain Colon Ovary Placenta
ENST00000478717 1.530±0.00 2.201±0.00 0.956±0.00 1.695±0.00 3.733±0.00 1.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M0 CIL_0000M0_0001 CGP 15:84884654-85139145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system
GO:0004114 NAS 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004871 IEA signal transducer activity
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009187 NAS cyclic nucleotide metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026672 Pde8a-001 protein_coding Mus_musculus 0 1652
ENSMUST00000022192 Pde8b-014 protein_coding Mus_musculus 0 494
ENSMUST00000067082 Pde8b-013 protein_coding Mus_musculus 0 494
ENSMUST00000162153 Pde8b-004 protein_coding Mus_musculus 0 494
ENSMUST00000162292 Pde8b-005 protein_coding Mus_musculus 0 494
ENSMUST00000162412 Pde8b-001 protein_coding Mus_musculus 0 494
ENSMUST00000130494 Pde8a-002 processed_transcript Mus_musculus 0 416
ENSMUST00000172104 Pde8b-012 protein_coding Mus_musculus 0 398
ENSMUST00000162882 Pde8b-006 processed_transcript Mus_musculus 0 398
ENSMUST00000128154 Pde8a-003 processed_transcript Mus_musculus 0 385

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