C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000M0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156222-ENSG00000073417 CGP 9606 15:84884654-85139145
GeneTranscriptPositionBiotype
ENSG00000073417 (PDE8A)
phosphodiesterase 8A 		ENST00000310298 (PDE8A-001) 84980440-85139145 protein_coding
ENST00000339708 (PDE8A-002) 84981981-85138032 protein_coding
ENST00000394553 (PDE8A-201) 84981974-85139136 protein_coding
ENST00000478717 (PDE8A-003) 84981981-85138032 nonsense_mediated_decay
ENST00000485596 (PDE8A-004) 84981981-85138032 nonsense_mediated_decay
ENST00000557819 (PDE8A-010) 85067028-85113400 processed_transcript
ENST00000557954 (PDE8A-012) 85099757-85113956 retained_intron
ENST00000557957 (PDE8A-005) 84980513-85139142 protein_coding
ENST00000558543 (PDE8A-011) 85097803-85114038 retained_intron
ENST00000559086 (PDE8A-009) 84982226-85109130 nonsense_mediated_decay
ENST00000559742 (PDE8A-006) 84981981-85138032 nonsense_mediated_decay
ENST00000560333 (PDE8A-014) 85115769-85117832 retained_intron
ENST00000560789 (PDE8A-007) 85062497-85138607 retained_intron
ENST00000561024 (PDE8A-008) 85120191-85139142 retained_intron
ENST00000561105 (PDE8A-015) 85099979-85100258 retained_intron
ENST00000561374 (PDE8A-013) 85115256-85116309 retained_intron
ENSG00000156222 (SLC28A1)
solute carrier family 28 (concentrative nucleoside transporter), member 1 		ENST00000286749 (SLC28A1-001) 84884678-84945796 protein_coding
ENST00000338602 (SLC28A1-002) 84884654-84896046 protein_coding
ENST00000394573 (SLC28A1-201) 84884661-84945796 protein_coding
ENST00000538177 (SLC28A1-202) 84884661-84945796 protein_coding
ENSG00000207037 (RNU6-339P)
RNA, U6 small nuclear 339, pseudogene 		ENST00000384310 (RNU6-339P-201) 84938416-84938522 snRNA
ENSG00000271044 (RP11-255M6.1)
 ENST00000604365 (RP11-255M6.1-001) 84940504-84941133 processed_pseudogene
CIL_0000M0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025726-ENSMUSG00000025584 CGP 10090 7:81114799-81334533
GeneTranscriptPositionBiotype
ENSMUSG00000025584 (Pde8a)
phosphodiesterase 8A 		ENSMUST00000026672 (Pde8a-001) 81213596-81334533 protein_coding
ENSMUST00000128154 (Pde8a-003) 81295707-81315187 processed_transcript
ENSMUST00000130494 (Pde8a-002) 81306693-81319440 processed_transcript
ENSMUSG00000025726 (Slc28a1)
solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 		ENSMUST00000026820 (Slc28a1-001) 81114799-81170416 protein_coding
ENSMUST00000119083 (Slc28a1-002) 81114850-81170416 protein_coding
ENSMUSG00000083774 (Gm7180)
predicted pseudogene 7180 		ENSMUST00000121753 (Gm7180-001) 81222362-81222874 processed_pseudogene
ENSMUSG00000083820 (Gm6415)
predicted pseudogene 6415 		ENSMUST00000118488 (Gm6415-001) 81161397-81161744 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M0_0001ENSG00000073417ENST00000310298ENST00000339708ENST00000394553ENST00000478717ENST00000485596ENST00000557819ENST00000557954ENST00000557957ENST00000558543ENST00000559086ENST00000559742ENST00000560333ENST00000560789ENST00000561024ENST00000561105ENST00000561374ENSG00000156222ENST00000286749ENST00000338602ENST00000394573ENST00000538177ENSG00000207037ENST00000384310ENSG00000271044ENST00000604365CIL_0000M0_0002ENSMUSG00000025584ENSMUST00000026672ENSMUST00000128154ENSMUST00000130494ENSMUSG00000025726ENSMUST00000026820ENSMUST00000119083ENSMUSG00000083774ENSMUST00000121753ENSMUSG00000083820ENSMUST00000118488
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M0_0001ENSG00000073417ENST00000310298ENST00000339708ENST00000394553ENST00000478717ENST00000485596ENST00000557957ENST00000559742ENST00000560789ENST00000561024ENSG00000156222ENST00000286749ENST00000338602ENST00000394573ENST00000538177ENSG00000207037ENST00000384310ENSG00000271044ENST00000604365CIL_0000M0_0002ENSMUSG00000025584ENSMUST00000026672ENSMUSG00000025726ENSMUST00000026820ENSMUSG00000083774ENSMUST00000121753ENSMUSG00000083820ENSMUST00000118488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073417 ENST00000310298 N/A N/A N/A N/A N/A 0.708±0.00 0.784±0.00 4.786±0.00 N/A N/A N/A 0.950±0.00 0.528±0.00 N/A
ENST00000339708 2.232±0.00 N/A N/A N/A N/A 1.357±0.00 N/A N/A N/A 1.526±0.00 N/A N/A N/A N/A
ENST00000394553 3.320±0.00 1.467±0.00 N/A 1.987±0.02 3.052±1.97 1.702±0.70 0.701±0.20 3.589±0.00 2.823±1.18 2.577±0.00 1.022±0.00 1.973±0.86 2.524±0.19 2.502±0.00
ENST00000478717 N/A 1.530±0.00 2.201±0.00 0.956±0.00 N/A 1.695±0.00 N/A N/A N/A N/A N/A 3.733±0.00 1.088±0.00 N/A
ENST00000485596 1.894±0.00 N/A N/A 3.111±0.00 0.982±0.00 1.122±0.00 N/A N/A N/A N/A N/A 4.167±0.00 1.968±0.00 N/A
ENST00000557819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557957 1.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.521±0.25 N/A 3.632±0.00
ENST00000558543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559742 N/A N/A N/A 2.613±0.00 N/A N/A 0.934±0.42 N/A N/A 1.341±0.00 0.862±0.00 N/A N/A 3.613±0.00
ENST00000560333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560789 N/A N/A N/A N/A 0.896±0.00 N/A N/A N/A 0.851±0.00 N/A N/A N/A N/A N/A
ENST00000561024 N/A N/A 1.612±0.00 2.463±1.12 1.747±0.00 2.109±0.75 N/A 2.158±0.30 N/A N/A 0.932±0.00 1.803±0.70 N/A 2.398±0.61
ENST00000561105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156222 ENST00000286749 N/A N/A N/A 0.023±0.00 0.047±0.00 N/A 0.167±0.00 3.208±0.00 N/A N/A N/A 0.130±0.00 0.147±0.01 N/A
ENST00000338602 N/A N/A 1.694±0.00 N/A 0.105±0.00 N/A 0.069±0.05 4.928±3.35 9.059±0.00 0.067±0.00 N/A 0.154±0.00 N/A 0.030±0.00
ENST00000394573 N/A N/A N/A N/A N/A N/A N/A N/A 14.334±0.00 N/A N/A N/A N/A 0.023±0.00
ENST00000538177 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 0.073±0.00 0.892±0.01 N/A
ENSG00000207037 ENST00000384310 N/A N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A N/A N/A
ENSG00000271044 ENST00000604365 N/A N/A 0.239±0.00 N/A N/A N/A N/A 0.242±0.06 0.062±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025584 ENSMUST00000026672 12.756±0.74 7.392±1.97 6.792±0.09 1.903±0.94 7.769±2.27 2.892±0.56 3.735±0.40 15.799±2.38 4.540±2.34 6.630±0.80 2.773±0.34 10.606±2.54 9.473±1.42 35.223±16.35
ENSMUST00000128154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025726 ENSMUST00000026820 0.065±0.03 0.022±0.01 0.013±0.00 0.015±0.01 0.048±0.02 0.030±0.01 0.058±0.00 7.713±2.08 0.279±0.21 0.054±0.03 0.156±0.05 0.415±0.19 2.017±2.53 0.502±0.47
ENSMUST00000119083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083774 ENSMUST00000121753 0.442±0.11 0.286±0.00 0.154±0.00 0.229±0.18 0.381±0.04 0.433±0.03 0.273±0.18 0.305±0.15 0.221±0.10 0.297±0.08 N/A 0.881±0.34 0.337±0.00 0.224±0.05
ENSMUSG00000083820 ENSMUST00000118488 N/A 0.293±0.00 N/A 0.180±0.00 N/A N/A N/A 0.643±0.48 0.111±0.04 N/A N/A 0.717±0.00 0.216±0.05 0.789±0.40

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