C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559742 PDE8A-006 ENSG00000073417 9606 + 15:84981981-85138032 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungMuscleTestisENST00000559742
Transcript ID Brain Heart Lung Muscle Testis
ENST00000559742 2.613±0.00 0.934±0.42 1.341±0.00 0.862±0.00 3.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M0 CIL_0000M0_0001 CGP 15:84884654-85139145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026672 Pde8a-001 protein_coding Mus_musculus 0 1500
ENSMUST00000022192 Pde8b-014 protein_coding Mus_musculus 0 494
ENSMUST00000067082 Pde8b-013 protein_coding Mus_musculus 0 494
ENSMUST00000162153 Pde8b-004 protein_coding Mus_musculus 0 494
ENSMUST00000162292 Pde8b-005 protein_coding Mus_musculus 0 494
ENSMUST00000162412 Pde8b-001 protein_coding Mus_musculus 0 494
ENSMUST00000130494 Pde8a-002 processed_transcript Mus_musculus 0 416
ENSMUST00000172104 Pde8b-012 protein_coding Mus_musculus 0 398
ENSMUST00000162882 Pde8b-006 processed_transcript Mus_musculus 0 398
ENSMUST00000128154 Pde8a-003 processed_transcript Mus_musculus 0 233

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