C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026820 Slc28a1-001 ENSMUSG00000025726 10090 + 7:81114799-81170416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026820
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026820 0.065±0.03 0.022±0.01 0.013±0.00 0.015±0.01 0.048±0.02 0.030±0.01 0.058±0.00 7.713±2.08 0.279±0.21 0.054±0.03 0.156±0.05 0.415±0.19 2.017±2.53 0.502±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M4 CIL_0000M4_0002 CGP 7:81057600-81170416
CIL_0000M0 CIL_0000M0_0002 CGP 7:81114799-81334533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0016020 IEA membrane
GO:1901642 IEA nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286749 SLC28A1-001 protein_coding Homo_sapiens 0 1847
ENST00000394573 SLC28A1-201 protein_coding Homo_sapiens 0 1847
ENST00000538177 SLC28A1-202 protein_coding Homo_sapiens 0 957

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