C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (concentrative nucleoside transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286749 SLC28A1-001 ENSG00000156222 9606 + 15:84884678-84945796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyOvaryPlacentaENST00000286749
Transcript ID Brain Breast Heart Kidney Ovary Placenta
ENST00000286749 0.023±0.00 0.047±0.00 0.167±0.00 3.208±0.00 0.130±0.00 0.147±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M4 CIL_0000M4_0001 CGP 15:84816680-84945796
CIL_0000M0 CIL_0000M0_0001 CGP 15:84884654-85139145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005337 TAS nucleoside transmembrane transporter activity
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006810 IEA transport
GO:0015858 TAS nucleoside transport
GO:0016020 TAS:IEA membrane
GO:0055085 TAS transmembrane transport
GO:1901642 IEA nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119083 Slc28a1-002 protein_coding Mus_musculus 0 1851
ENSMUST00000026820 Slc28a1-001 protein_coding Mus_musculus 0 1847

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