C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 96
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026881 Ly96-001 ENSMUSG00000025779 10090 + 1:16688433-16709611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026881 3.841±0.35 2.119±1.30 8.856±0.86 0.553±0.18 3.336±0.78 1.690±0.90 2.275±0.33 5.095±1.72 3.083±0.88 3.377±0.53 0.337±0.21 2.096±2.04 3.543±2.19 0.762±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OM CIL_0002OM_0002 CGP 1:16665207-16709611
CIL_0002OK CIL_0002OK_0002 CGP 1:16688051-17097889

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001875 ISS lipopolysaccharide receptor activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0006954 IEA inflammatory response
GO:0031663 IEA lipopolysaccharide-mediated signaling pathway
GO:0031666 IDA positive regulation of lipopolysaccharide-mediated signaling pathway
GO:0032496 IEA response to lipopolysaccharide
GO:0032497 ISS detection of lipopolysaccharide
GO:0045087 IEA innate immune response
GO:0046696 IEA lipopolysaccharide receptor complex

Homologs

No Homologs available.

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