C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein, kinesin binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332624 TRAK2-001 ENSG00000115993 9606 - 2:201377207-201451579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332624
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332624 15.782±0.00 10.055±0.00 7.956±4.41 7.072±3.45 9.338±3.79 16.694±10.63 7.709±7.13 3.883±1.39 6.953±0.00 2.237±1.33 3.849±0.85 6.090±1.08 6.499±4.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0000JJ CIL_0000JJ_0002 CGP 2:201377207-201480846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 ISS receptor binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005768 IEA endosome
GO:0005886 ISS plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006493 IEA protein O-linked glycosylation
GO:0006605 IEA protein targeting
GO:0019899 IEA enzyme binding
GO:0050811 NAS GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027186 Trak2-001 protein_coding Mus_musculus 0 3171
ENSMUST00000174120 Trak2-002 protein_coding Mus_musculus 0 2063

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