C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 27, subfamily a, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027356 Cyp27a1-001 ENSMUSG00000026170 10090 + 1:74713574-74737892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027356
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027356 12.528±0.88 2.644±0.60 18.150±6.05 0.530±0.47 5.988±0.59 5.930±1.37 3.341±1.11 8.638±1.37 60.235±56.37 6.323±0.71 38.047±8.47 4.849±2.23 1.257±0.91 1.963±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000653 CIL_000653_0002 CGP 1:74661745-74737892
CIL_00064U CIL_00064U_0002 CGP 1:74713574-74749221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005739 IDA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005743 IDA mitochondrial inner membrane
GO:0008203 IEA cholesterol metabolic process
GO:0020037 IEA heme binding
GO:0030343 IEA vitamin D3 25-hydroxylase activity
GO:0031073 IEA cholesterol 26-hydroxylase activity
GO:0036378 IEA calcitriol biosynthetic process from calciol
GO:0047749 IEA cholestanetriol 26-monooxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258415 CYP27A1-001 protein_coding Homo_sapiens 0 1086
ENST00000494263 CYP27A1-002 retained_intron Homo_sapiens 0 736

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