C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 27, subfamily A, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258415 CYP27A1-001 ENSG00000135929 9606 + 2:218781756-218815293 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258415 12.564±0.00 10.205±0.00 2.189±0.00 10.576±8.64 9.156±8.00 20.283±0.00 2.940±1.74 44.882±34.19 177.647±0.00 26.730±21.31 9.585±0.00 18.075±15.90 2.625±1.35 7.754±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000653 CIL_000653_0001 CGP 2:218710845-218815293
CIL_00064U CIL_00064U_0001 CGP 2:218781749-218832086

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005739 IEA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005743 IEA mitochondrial inner membrane
GO:0005759 TAS mitochondrial matrix
GO:0006699 TAS bile acid biosynthetic process
GO:0006805 TAS xenobiotic metabolic process
GO:0008203 IEA cholesterol metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0008395 TAS steroid hydroxylase activity
GO:0016125 TAS sterol metabolic process
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0030343 IEA vitamin D3 25-hydroxylase activity
GO:0031073 IEA cholesterol 26-hydroxylase activity
GO:0036378 IEA calcitriol biosynthetic process from calciol
GO:0044281 TAS small molecule metabolic process
GO:0047749 IEA cholestanetriol 26-monooxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027356 Cyp27a1-001 protein_coding Mus_musculus 0 1086

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