C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRB10 interacting GYF protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027475 Gigyf2-001 ENSMUSG00000048000 10090 + 1:87327003-87450796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027475
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027475 3.006±0.83 4.787±1.33 1.606±0.25 0.800±0.00 1.874±0.10 3.130±1.83 1.404±0.00 4.617±0.79 10.204±2.45 16.343±10.23 2.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HW CIL_0003HW_0002 CGP 1:87264363-87450796
CIL_0003HP CIL_0003HP_0002 CGP 1:87326998-87450796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007631 IMP feeding behavior
GO:0008344 IMP adult locomotory behavior
GO:0009791 IMP post-embryonic development
GO:0016020 IEA membrane
GO:0017148 IEA negative regulation of translation
GO:0021522 IMP spinal cord motor neuron differentiation
GO:0031571 IMP mitotic G1 DNA damage checkpoint
GO:0035264 IMP multicellular organism growth
GO:0044267 IMP cellular protein metabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0048009 IMP insulin-like growth factor receptor signaling pathway
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0050881 IMP musculoskeletal movement
GO:0050885 IMP neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373563 GIGYF2-006 protein_coding Homo_sapiens 0 4918
ENST00000409196 GIGYF2-003 protein_coding Homo_sapiens 0 4639
ENST00000409451 GIGYF2-005 protein_coding Homo_sapiens 0 3919
ENST00000409480 GIGYF2-004 protein_coding Homo_sapiens 0 3938
ENST00000409547 GIGYF2-001 protein_coding Homo_sapiens 0 4748
ENST00000410033 GIGYF2-040 protein_coding Homo_sapiens 0 575
ENST00000421433 GIGYF2-024 protein_coding Homo_sapiens 0 412
ENST00000421778 GIGYF2-036 protein_coding Homo_sapiens 0 383
ENST00000423659 GIGYF2-012 protein_coding Homo_sapiens 0 2146
ENST00000424038 GIGYF2-032 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000424414 GIGYF2-039 protein_coding Homo_sapiens 0 505
ENST00000425040 GIGYF2-025 protein_coding Homo_sapiens 0 446
ENST00000426102 GIGYF2-044 protein_coding Homo_sapiens 0 617
ENST00000427233 GIGYF2-015 protein_coding Homo_sapiens 3e-30 135
ENST00000427649 GIGYF2-047 protein_coding Homo_sapiens 0 712
ENST00000428883 GIGYF2-017 protein_coding Homo_sapiens 0 555
ENST00000429187 GIGYF2-029 protein_coding Homo_sapiens 0 479
ENST00000430720 GIGYF2-026 protein_coding Homo_sapiens 0 508
ENST00000436349 GIGYF2-038 protein_coding Homo_sapiens 0 580
ENST00000440945 GIGYF2-007 protein_coding Homo_sapiens 0 3269
ENST00000445650 GIGYF2-035 protein_coding Homo_sapiens 0 492
ENST00000455139 GIGYF2-037 protein_coding Homo_sapiens 0 579
ENST00000456491 GIGYF2-019 protein_coding Homo_sapiens 2e-27 126
ENST00000463554 GIGYF2-011 processed_transcript Homo_sapiens 0 915
ENST00000469843 GIGYF2-043 processed_transcript Homo_sapiens 0 346
ENST00000471011 GIGYF2-045 retained_intron Homo_sapiens 0 459
ENST00000474312 GIGYF2-013 retained_intron Homo_sapiens 0 2281
ENST00000476995 GIGYF2-014 processed_transcript Homo_sapiens 6.02558e-44 182
ENST00000482952 GIGYF2-042 retained_intron Homo_sapiens 0 614
ENST00000484409 GIGYF2-018 retained_intron Homo_sapiens 6e-21 104

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