C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gypsy retrotransposon integrase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027571 Gin1-002 ENSMUSG00000026333 10090 + 1:97770197-97793709 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000027571
Transcript ID Muscle
ENSMUST00000027571 0.383±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0015074 IEA DNA integration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399004 GIN1-001 protein_coding Homo_sapiens 0 905
ENST00000508629 GIN1-003 protein_coding Homo_sapiens 0 381
ENST00000511400 GIN1-005 processed_transcript Homo_sapiens 0.0000000001 71
ENST00000512248 GIN1-002 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000513603 GIN1-004 retained_intron Homo_sapiens 0 398
ENST00000513747 GIN1-006 nonsense_mediated_decay Homo_sapiens 0 196

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