C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027592 Ubxn4-001 ENSMUSG00000026353 10090 + 1:128244162-128279378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027592 13.333±1.52 22.155±2.65 17.035±1.26 12.393±6.32 9.414±0.81 10.466±4.27 6.805±0.75 12.477±0.78 14.603±4.80 13.523±0.75 11.825±0.58 17.840±8.62 25.262±4.37 13.971±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VO CIL_0006VO_0002 CGP 1:128103301-128279378
CIL_0003NN CIL_0003NN_0002 CGP 1:128243964-128328318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0006986 IEA response to unfolded protein
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272638 UBXN4-001 protein_coding Homo_sapiens 0 1751
ENST00000415164 UBXN4-004 protein_coding Homo_sapiens 2.8026e-45 185
ENST00000416538 UBXN4-002 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000426921 UBXN4-005 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000490163 UBXN4-003 processed_transcript Homo_sapiens 0 1038

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