C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272638 UBXN4-001 ENSG00000144224 9606 + 2:135741619-135785055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272638 20.420±0.00 11.447±0.00 0.786±0.00 10.560±8.02 16.536±0.00 8.405±6.20 13.504±0.00 10.866±7.59 11.567±1.78 24.830±0.00 20.461±0.00 24.471±11.64 13.149±1.15 37.395±7.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VO CIL_0006VO_0001 CGP 2:135531455-135785055
CIL_0003NN CIL_0003NN_0001 CGP 2:135741619-135837180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0006986 IEA response to unfolded protein
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027592 Ubxn4-001 protein_coding Mus_musculus 0 1751
ENSMUST00000187031 Ubxn4-004 retained_intron Mus_musculus 0 689
ENSMUST00000190736 Ubxn4-003 protein_coding Mus_musculus 0 318

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