C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006VO_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000048991-ENSG00000144224 | CGP | 9606 | 2:135531455-135785055  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000048991  (R3HDM1)R3H domain containing 1 |
ENST00000264160 (R3HDM1-001)
|
135531513-135725270 | protein_coding | |
|
ENST00000409478 (R3HDM1-004)
|
135531501-135725266 | protein_coding | ||
|
ENST00000409606 (R3HDM1-006)
|
135586437-135724343 | protein_coding | ||
|
ENST00000410054 (R3HDM1-005)
|
135586250-135725268 | protein_coding | ||
|
ENST00000425804 (R3HDM1-015)
|
135638899-135651940 | protein_coding | ||
|
ENST00000429703 (R3HDM1-007)
|
135638733-135725265 | protein_coding | ||
|
ENST00000436436 (R3HDM1-011)
|
135586352-135631743 | protein_coding | ||
|
ENST00000438014 (R3HDM1-010)
|
135531517-135604820 | protein_coding | ||
|
ENST00000441871 (R3HDM1-014)
|
135638641-135651774 | protein_coding | ||
|
ENST00000443537 (R3HDM1-013)
|
135638618-135649331 | processed_transcript | ||
|
ENST00000445855 (R3HDM1-020)
|
135675398-135722537 | protein_coding | ||
|
ENST00000456040 (R3HDM1-012)
|
135604856-135636183 | protein_coding | ||
|
ENST00000463230 (R3HDM1-003)
|
135531473-135606676 | retained_intron | ||
|
ENST00000480793 (R3HDM1-019)
|
135621512-135631938 | processed_transcript | ||
|
ENST00000483021 (R3HDM1-008)
|
135531455-135602670 | processed_transcript | ||
|
ENST00000483065 (R3HDM1-017)
|
135721509-135722547 | retained_intron | ||
|
ENST00000486532 (R3HDM1-018)
|
135633712-135639114 | processed_transcript | ||
|
ENST00000487294 (R3HDM1-016)
|
135645233-135652021 | retained_intron | ||
|
ENST00000488035 (R3HDM1-009)
|
135531527-135632001 | processed_transcript | ||
|
ENSG00000144224 (UBXN4) UBX domain protein 4 |
ENST00000272638 (UBXN4-001)
|
135741619-135785055 | protein_coding | |
|
ENST00000415164 (UBXN4-004)
|
135741734-135754188 | protein_coding | ||
|
ENST00000416538 (UBXN4-002)
|
135741868-135761911 | nonsense_mediated_decay | ||
|
ENST00000426921 (UBXN4-005)
|
135741786-135761881 | nonsense_mediated_decay | ||
|
ENST00000467065 (UBXN4-008)
|
135742523-135748369 | processed_transcript | ||
|
ENST00000470687 (UBXN4-006)
|
135748111-135755658 | retained_intron | ||
|
ENST00000471246 (UBXN4-007)
|
135772447-135780221 | retained_intron | ||
|
ENST00000490163 (UBXN4-003)
|
135754152-135785055 | processed_transcript | ||
| CIL_0006VO_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000056211-ENSMUSG00000026353 | CGP | 10090 | 1:128103301-128279378 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026353 (Ubxn4) UBX domain protein 4 |
ENSMUST00000027592 (Ubxn4-001)
|
128244162-128279378 | protein_coding | |
|
ENSMUST00000187031 (Ubxn4-004)
|
128259504-128273166 | retained_intron | ||
|
ENSMUST00000189895 (Ubxn4-005)
|
128274627-128277020 | retained_intron | ||
|
ENSMUST00000190736 (Ubxn4-003)
|
128243964-128259535 | protein_coding | ||
|
ENSMUSG00000056211 (R3hdm1) R3H domain containing 1 |
ENSMUST00000036288 (R3hdm1-001)
|
128103324-128237736 | protein_coding | |
|
ENSMUST00000185389 (R3hdm1-010)
|
128103331-128111788 | retained_intron | ||
|
ENSMUST00000185471 (R3hdm1-005)
|
128176837-128188656 | retained_intron | ||
|
ENSMUST00000185853 (R3hdm1-015)
|
128179143-128193500 | protein_coding | ||
|
ENSMUST00000187023 (R3hdm1-011)
|
128141964-128186909 | protein_coding | ||
|
ENSMUST00000187557 (R3hdm1-012)
|
128141987-128153326 | protein_coding | ||
|
ENSMUST00000187605 (R3hdm1-009)
|
128171631-128178143 | retained_intron | ||
|
ENSMUST00000187900 (R3hdm1-004)
|
128103324-128188856 | protein_coding | ||
|
ENSMUST00000188381 (R3hdm1-003)
|
128103321-128179129 | protein_coding | ||
|
ENSMUST00000188570 (R3hdm1-007)
|
128235379-128237736 | retained_intron | ||
|
ENSMUST00000189317 (R3hdm1-013)
|
128151814-128179182 | protein_coding | ||
|
ENSMUST00000189982 (R3hdm1-008)
|
128192832-128196540 | retained_intron | ||
|
ENSMUST00000190056 (R3hdm1-016)
|
128181741-128211239 | protein_coding | ||
|
ENSMUST00000190288 (R3hdm1-006)
|
128206992-128237735 | retained_intron | ||
|
ENSMUST00000191016 (R3hdm1-002)
|
128103301-128183131 | retained_intron | ||
|
ENSMUST00000191274 (R3hdm1-014)
|
128174693-128179117 | retained_intron | ||
|
ENSMUSG00000065520 (Mir128-1) microRNA 128-1 |
ENSMUST00000083586 (Mir128-1-201)
|
128202355-128202436 | miRNA | |
|
ENSMUSG00000101535 (RP23-264E23.3) predicted gene 29383 |
ENSMUST00000188284 (RP23-264E23.3-001)
|
128128410-128128889 | processed_pseudogene | |
Expression Patterns
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