C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027792 Srp9-001 ENSMUSG00000026511 10090 + 1:182124750-182132407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027792 26.882±3.27 46.454±3.07 37.328±4.04 25.774±7.28 25.960±4.64 32.699±1.90 19.983±2.60 37.988±2.32 39.867±4.71 28.068±0.97 26.471±1.45 30.117±6.19 42.118±21.60 49.013±16.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R5 CIL_0007R5_0002 VISTA 1:181809962-182412053
CIL_0000BU CIL_0000BU_0003 CGP 1:181904445-182132407

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005786 IEA signal recognition particle, endoplasmic reticulum targeting
GO:0006614 IEA SRP-dependent cotranslational protein targeting to membrane
GO:0008312 IEA 7S RNA binding
GO:0045900 IEA negative regulation of translational elongation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304786 SRP9-001 protein_coding Homo_sapiens 0 363
ENST00000366838 SRP9-003 protein_coding Homo_sapiens 0 193
ENST00000366839 SRP9-002 protein_coding Homo_sapiens 0 191
ENST00000445874 SRP9P1-001 processed_pseudogene Homo_sapiens 0 316

Loading