C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028083 Psmb7-001 ENSMUSG00000026750 10090 - 2:38588036-38644087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028083 50.439±3.42 16.852±0.09 109.948±12.23 93.266±35.62 39.002±21.29 28.088±0.00 65.030±6.29 57.010±12.39 110.005±62.57 30.872±7.36 172.070±13.74 45.234±26.12 124.198±64.62 45.627±12.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MV CIL_0007MV_0002 UCNEbase 2:38111928-38614796
CIL_0008N3 CIL_0008N3_0002 VISTA 2:38235055-38837083
CIL_00098L CIL_00098L_0002 VISTA 2:38294702-38895720
CIL_0006WH CIL_0006WH_0002 CGP 2:38339281-38588041
CIL_0006WG CIL_0006WG_0002 CGP 2:38511643-38644087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0015630 IEA microtubule cytoskeleton
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259457 PSMB7-001 protein_coding Homo_sapiens 0 1114
ENST00000441097 PSMB7-003 protein_coding Homo_sapiens 0 730
ENST00000466951 PSMB7-006 processed_transcript Homo_sapiens 0 392
ENST00000474081 PSMB7-004 processed_transcript Homo_sapiens 4e-19 99
ENST00000478817 PSMB7-005 processed_transcript Homo_sapiens 2e-20 102
ENST00000498485 PSMB7-002 processed_transcript Homo_sapiens 0 453
ENST00000556349 PSMB7P1-001 unitary_pseudogene Homo_sapiens 0 329

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