C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) subunit, beta type 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026750 Psmb7 10090 - 2:38588036-38644087 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028083 Psmb7-001 38588036-38644087 protein_coding
  ENSMUST00000151981 Psmb7-002 38613378-38643889 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028083ENSMUST00000151981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028083 50.439±3.42 16.852±0.09 109.948±12.23 93.266±35.62 39.002±21.29 28.088±0.00 65.030±6.29 57.010±12.39 110.005±62.57 30.872±7.36 172.070±13.74 45.234±26.12 124.198±64.62 45.627±12.54
ENSMUST00000151981 41.098±7.78 44.865±8.69 N/A N/A 54.397±24.01 N/A 41.626±4.43 40.306±5.11 66.066±12.92 25.179±4.14 N/A 47.349±4.70 N/A 28.794±8.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MV CIL_0007MV_0002 UCNEbase 2:38111928-38614796
CIL_0008N3 CIL_0008N3_0002 VISTA 2:38235055-38837083
CIL_00098L CIL_00098L_0002 VISTA 2:38294702-38895720
CIL_0006WH CIL_0006WH_0002 CGP 2:38339281-38588041
CIL_0006WG CIL_0006WG_0002 CGP 2:38511643-38644087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0015630 IEA microtubule cytoskeleton
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037962 psmb7 proteasome (prosome, macropain) subunit, beta type, 7 protein_coding Danio_rerio
ENSG00000136930 PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 protein_coding Homo_sapiens

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