C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth factor independent 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028156 Gfi1b-001 ENSMUSG00000026815 10090 - 2:28609455-28621945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000028156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000028156 0.124±0.01 0.069±0.05 0.044±0.00 0.007±0.00 0.463±0.21 0.397±0.14 0.032±0.00 0.021±0.00 32.998±22.13 0.171±0.08 0.106±0.06 0.606±0.56 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H4 CIL_0000H4_0002 CGP 2:28609450-28691167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0030854 IDA positive regulation of granulocyte differentiation
GO:0045646 IMP regulation of erythrocyte differentiation
GO:0046872 IEA metal ion binding
GO:0051572 IMP negative regulation of histone H3-K4 methylation
GO:0051574 IMP positive regulation of histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000074683 EVI5L-201 protein_coding Danio_rerio 0 213
ENST00000294702 GFI1-002 protein_coding Homo_sapiens 0 444
ENST00000339463 GFI1B-003 protein_coding Homo_sapiens 0 1050
ENST00000341976 ZNF70-001 protein_coding Homo_sapiens 0.00000000000009 84
ENST00000370332 GFI1-001 protein_coding Homo_sapiens 0 444
ENST00000372122 GFI1B-002 protein_coding Homo_sapiens 0 1022
ENST00000372123 GFI1B-001 protein_coding Homo_sapiens 0 505
ENST00000427103 GFI1-201 protein_coding Homo_sapiens 0 444
ENST00000534944 GFI1B-201 protein_coding Homo_sapiens 0 505

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