C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000H4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079947-ENSDARG00000057918 CGP 7955 21:15791894-15851417
GeneTranscriptPositionBiotype
ENSDARG00000079947 (gfi1b)
growth factor independent 1B transcription repressor 		ENSDART00000114877 (gfi1b-201) 15791935-15807562 protein_coding
ENSDART00000147993 (gfi1b-001) 15791894-15802526 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000H4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026815-ENSMUSG00000026812 CGP 10090 2:28609450-28691167
GeneTranscriptPositionBiotype
ENSMUSG00000026812 (Tsc1)
tuberous sclerosis 1 		ENSMUST00000028155 (Tsc1-002) 28641237-28691167 protein_coding
ENSMUST00000113867 (Tsc1-007) 28641243-28691167 protein_coding
ENSMUST00000113869 (Tsc1-001) 28641241-28691167 protein_coding
ENSMUST00000113870 (Tsc1-201) 28658567-28691167 protein_coding
ENSMUST00000124507 (Tsc1-008) 28641254-28667959 retained_intron
ENSMUST00000125715 (Tsc1-010) 28671015-28673187 retained_intron
ENSMUST00000133565 (Tsc1-004) 28641241-28688548 nonsense_mediated_decay
ENSMUST00000139642 (Tsc1-005) 28672278-28673329 retained_intron
ENSMUST00000150274 (Tsc1-009) 28663392-28665965 retained_intron
ENSMUST00000153625 (Tsc1-006) 28641250-28673753 retained_intron
ENSMUST00000156857 (Tsc1-003) 28641228-28672507 nonsense_mediated_decay
ENSMUSG00000026815 (Gfi1b)
growth factor independent 1B 		ENSMUST00000028156 (Gfi1b-001) 28609455-28621945 protein_coding
ENSMUST00000145690 (Gfi1b-002) 28614791-28621982 processed_transcript
ENSMUST00000155686 (Gfi1b-003) 28614784-28615405 processed_transcript
ENSMUST00000164290 (Gfi1b-201) 28609450-28621982 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000H4_0001ENSDARG00000079947ENSDART00000114877ENSDART00000147993CIL_0000H4_0002ENSMUSG00000026812ENSMUST00000028155ENSMUST00000113867ENSMUST00000113869ENSMUST00000113870ENSMUST00000124507ENSMUST00000125715ENSMUST00000133565ENSMUST00000139642ENSMUST00000150274ENSMUST00000153625ENSMUST00000156857ENSMUSG00000026815ENSMUST00000028156ENSMUST00000145690ENSMUST00000155686ENSMUST00000164290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000H4_0001ENSDARG00000079947ENSDART00000114877ENSDART00000147993CIL_0000H4_0002ENSMUSG00000026812ENSMUST00000028155ENSMUST00000113867ENSMUST00000113869ENSMUST00000113870ENSMUST00000133565ENSMUST00000156857ENSMUSG00000026815ENSMUST00000028156ENSMUST00000145690ENSMUST00000164290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079947 ENSDART00000114877 N/A N/A N/A 0.054±0.00 N/A N/A 1.844±1.15 0.798±0.00 0.034±0.00 N/A 0.171±0.00 N/A N/A N/A
ENSDART00000147993 N/A N/A N/A 0.203±0.00 N/A N/A N/A 0.954±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026812 ENSMUST00000028155 1.435±0.71 1.581±0.42 2.040±0.14 4.997±0.19 3.773±1.28 3.501±1.27 2.412±0.56 3.561±0.79 2.736±0.90 2.609±0.00 2.373±0.86 4.479±1.42 2.932±0.82 3.122±1.24
ENSMUST00000113867 N/A 1.716±0.34 1.259±0.10 5.028±0.06 2.301±0.62 1.159±0.30 1.515±0.75 1.607±0.49 1.077±0.40 1.347±0.15 4.197±0.78 2.432±1.20 1.913±0.99 1.024±0.00
ENSMUST00000113869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.917±0.00 N/A N/A
ENSMUST00000113870 1.019±0.00 2.473±1.37 N/A 1.708±0.32 2.262±1.32 1.953±0.06 N/A 2.357±1.20 1.146±0.38 1.741±0.81 1.212±0.00 4.458±0.00 2.562±0.49 N/A
ENSMUST00000124507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133565 N/A N/A N/A 7.317±0.00 N/A N/A N/A N/A N/A N/A N/A 1.771±0.00 3.350±1.54 3.741±0.22
ENSMUST00000139642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156857 N/A N/A N/A N/A 8.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026815 ENSMUST00000028156 0.124±0.01 0.069±0.05 0.044±0.00 0.007±0.00 0.463±0.21 0.397±0.14 0.032±0.00 0.021±0.00 32.998±22.13 0.171±0.08 N/A 0.106±0.06 0.606±0.56 0.044±0.00
ENSMUST00000145690 N/A N/A 0.048±0.00 N/A N/A 0.996±0.00 N/A 0.195±0.11 N/A N/A N/A 0.205±0.00 0.707±0.44 N/A
ENSMUST00000155686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164290 0.120±0.09 0.050±0.03 0.059±0.00 0.045±0.03 0.324±0.08 0.173±0.06 0.025±0.00 0.032±0.00 15.676±6.83 0.126±0.04 N/A 0.090±0.01 0.807±0.31 N/A

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