C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like endophilin B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028214 Sh3glb2-001 ENSMUSG00000026860 10090 - 2:30344809-30359316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028214
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028214 66.553±25.69 22.525±8.78 42.851±6.74 29.683±11.29 28.221±5.29 17.987±1.06 25.142±2.71 11.605±2.65 26.234±8.80 4.073±1.31 30.983±10.38 15.137±5.84 3.865±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OJ CIL_0006OJ_0002 CGP 2:30286397-30359337
CIL_0006OZ CIL_0006OZ_0002 CGP 2:30344809-30385521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372554 SH3GLB2-008 protein_coding Homo_sapiens 0 1526
ENST00000372559 SH3GLB2-002 protein_coding Homo_sapiens 0 1613
ENST00000372564 SH3GLB2-001 protein_coding Homo_sapiens 0 1646
ENST00000416230 SH3GLB2-006 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000416629 SH3GLB2-012 protein_coding Homo_sapiens 0 771
ENST00000417224 SH3GLB2-011 protein_coding Homo_sapiens 0 1522
ENST00000425236 SH3GLB2-007 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000455407 SH3GLB2-005 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000461811 SH3GLB2-004 retained_intron Homo_sapiens 0 710
ENST00000477165 SH3GLB2-009 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000479237 SH3GLB2-003 retained_intron Homo_sapiens 0 673
ENST00000483980 SH3GLB2-010 retained_intron Homo_sapiens 0 1199

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