C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ceramide synthase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028426 Cers6-001 ENSMUSG00000027035 10090 + 2:68861441-69114282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028426
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028426 3.247±0.34 0.947±0.22 7.250±0.41 9.974±1.72 1.742±0.46 12.146±3.35 0.521±0.15 6.560±0.57 2.533±0.89 5.678±0.72 0.094±0.02 5.937±3.71 4.617±1.23 0.948±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063C CIL_00063C_0002 CGP 2:68861441-69189330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process
GO:0046513 IDA ceramide biosynthetic process
GO:0050291 IDA sphingosine N-acyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305747 CERS6-001 protein_coding Homo_sapiens 0 2008
ENST00000392687 CERS6-002 protein_coding Homo_sapiens 0 1895

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