C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxyacid oxidase 1, liver
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028704 Hao1-001 ENSMUSG00000027261 10090 - 2:134497361-134554368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000028704
Transcript ID Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028704 0.004±0.00 0.011±0.00 0.104±0.01 0.051±0.00 28.476±20.56 0.039±0.00 0.023±0.00 0.068±0.03 0.080±0.02 0.096±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W0 CIL_0002W0_0002 CGP 2:133552159-134554368
CIL_0002BM CIL_0002BM_0002 CGP 2:134497361-134644145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001561 ISS fatty acid alpha-oxidation
GO:0003973 ISS (S)-2-hydroxy-acid oxidase activity
GO:0005102 IEA receptor binding
GO:0005777 IDA peroxisome
GO:0006979 IEA response to oxidative stress
GO:0008891 ISS glycolate oxidase activity
GO:0010181 ISS FMN binding
GO:0046296 ISS glycolate catabolic process
GO:0052852 IEA very-long-chain-(S)-2-hydroxy-acid oxidase activity
GO:0052853 IEA long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity
GO:0052854 IEA medium-chain-(S)-2-hydroxy-acid oxidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378789 HAO1-001 protein_coding Homo_sapiens 0 1760

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