C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125845-ENSG00000101323 CGP 9606 20:6767664-7940474
GeneTranscriptPositionBiotype
ENSG00000101323 (HAO1)
hydroxyacid oxidase (glycolate oxidase) 1 		ENST00000378789 (HAO1-001) 7882981-7940474 protein_coding
ENSG00000125845 (BMP2)
bone morphogenetic protein 2 		ENST00000378827 (BMP2-001) 6767664-6780280 protein_coding
ENSG00000215586 (RP5-836E8.1)
 ENST00000400616 (RP5-836E8.1-001) 7831798-7832322 processed_pseudogene
ENSG00000224711 (RP5-988G17.1)
 ENST00000455299 (RP5-988G17.1-001) 7347467-7367632 lincRNA
ENSG00000228888 (LINC01428)
long intergenic non-protein coding RNA 1428 		ENST00000449581 (LINC01428-001) 7146467-7254202 lincRNA
ENSG00000238102 (RP11-19D2.1)
 ENST00000428954 (RP11-19D2.1-001) 7256580-7258214 lincRNA
ENSG00000261249 (RP11-19D2.2)
 ENST00000569178 (RP11-19D2.2-001) 7302056-7307432 lincRNA
ENSG00000277315 (RP1-209B9.2)
 ENST00000611756 (RP1-209B9.2-001) 7867327-7867614 processed_pseudogene
CIL_0002W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027358-ENSMUSG00000027261 CGP 10090 2:133552159-134554368
GeneTranscriptPositionBiotype
ENSMUSG00000027261 (Hao1)
hydroxyacid oxidase 1, liver 		ENSMUST00000028704 (Hao1-001) 134497361-134554368 protein_coding
ENSMUST00000140794 (Hao1-002) 134530760-134554307 processed_transcript
ENSMUSG00000027358 (Bmp2)
bone morphogenetic protein 2 		ENSMUST00000028836 (Bmp2-001) 133552159-133562885 protein_coding
ENSMUSG00000064983 (Gm25258)
predicted gene, 25258 		ENSMUST00000083049 (Gm25258-201) 133584315-133584421 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W0_0001ENSG00000101323ENST00000378789ENSG00000125845ENST00000378827ENSG00000215586ENST00000400616ENSG00000224711ENST00000455299ENSG00000228888ENST00000449581ENSG00000238102ENST00000428954ENSG00000261249ENST00000569178ENSG00000277315ENST00000611756CIL_0002W0_0002ENSMUSG00000027261ENSMUST00000028704ENSMUST00000140794ENSMUSG00000027358ENSMUST00000028836ENSMUSG00000064983ENSMUST00000083049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002W0_0001ENSG00000101323ENST00000378789ENSG00000125845ENST00000378827ENSG00000215586ENST00000400616ENSG00000224711ENST00000455299ENSG00000228888ENST00000449581ENSG00000238102ENST00000428954ENSG00000261249ENST00000569178ENSG00000277315ENST00000611756CIL_0002W0_0002ENSMUSG00000027261ENSMUST00000028704ENSMUST00000140794ENSMUSG00000027358ENSMUST00000028836ENSMUSG00000064983ENSMUST00000083049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101323 ENST00000378789 N/A N/A N/A N/A 0.256±0.00 N/A 0.060±0.00 42.102±41.82 74.568±0.00 N/A N/A N/A N/A 0.118±0.00
ENSG00000125845 ENST00000378827 2.590±0.00 2.378±0.00 0.347±0.00 1.437±0.93 2.784±1.97 2.353±0.10 0.655±0.38 1.654±1.15 1.289±0.29 5.451±3.77 0.516±0.07 0.826±0.51 7.120±5.13 0.909±0.57
ENSG00000215586 ENST00000400616 N/A N/A N/A N/A N/A N/A 0.054±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224711 ENST00000455299 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A 0.164±0.00
ENSG00000228888 ENST00000449581 N/A N/A 0.444±0.00 N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A 0.230±0.00
ENSG00000238102 ENST00000428954 N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 0.860±0.00 N/A N/A N/A N/A N/A
ENSG00000261249 ENST00000569178 N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000277315 ENST00000611756 N/A N/A N/A N/A N/A N/A N/A 2.502±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027261 ENSMUST00000028704 N/A N/A 0.004±0.00 0.011±0.00 0.104±0.01 0.051±0.00 N/A N/A 28.476±20.56 0.039±0.00 0.023±0.00 0.068±0.03 0.080±0.02 0.096±0.04
ENSMUST00000140794 0.121±0.00 N/A N/A N/A 0.183±0.07 N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.09
ENSMUSG00000027358 ENSMUST00000028836 1.554±0.41 8.862±1.21 11.354±1.13 0.404±0.13 2.074±0.90 21.030±3.20 0.382±0.13 0.970±0.28 1.804±0.61 2.509±0.34 0.344±0.08 9.596±3.79 0.658±0.28 0.053±0.03
ENSMUSG00000064983 ENSMUST00000083049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.237±0.00

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