C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxyacid oxidase (glycolate oxidase) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378789 HAO1-001 ENSG00000101323 9606 - 20:7882981-7940474 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverTestisENST00000378789
Transcript ID Breast Heart Kidney Liver Testis
ENST00000378789 0.256±0.00 0.060±0.00 42.102±41.82 74.568±0.00 0.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W0 CIL_0002W0_0001 CGP 20:6767664-7940474
CIL_0002BM CIL_0002BM_0001 CGP 20:7882981-8019829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001561 IDA fatty acid alpha-oxidation
GO:0003973 IDA (S)-2-hydroxy-acid oxidase activity
GO:0005102 IPI receptor binding
GO:0005777 IDA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006537 IEA glutamate biosynthetic process
GO:0006979 IEA response to oxidative stress
GO:0008891 IDA glycolate oxidase activity
GO:0010181 IDA:IEA FMN binding
GO:0015930 IEA glutamate synthase activity
GO:0016491 IEA oxidoreductase activity
GO:0016638 IEA oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046296 IEA glycolate catabolic process
GO:0046487 TAS glyoxylate metabolic process
GO:0047969 TAS glyoxylate oxidase activity
GO:0052852 IEA very-long-chain-(S)-2-hydroxy-acid oxidase activity
GO:0052853 IEA long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity
GO:0052854 IEA medium-chain-(S)-2-hydroxy-acid oxidase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028704 Hao1-001 protein_coding Mus_musculus 0 1760
ENSMUST00000140794 Hao1-002 processed_transcript Mus_musculus 2e-16 92

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