C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029082 Psma7-001 ENSMUSG00000027566 10090 - 2:180036374-180042433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029082 87.193±7.00 78.159±23.90 97.715±12.97 56.457±22.24 82.288±21.60 89.984±4.64 64.499±10.96 95.854±4.94 119.140±25.67 63.569±5.34 70.497±2.65 145.130±21.06 161.640±49.72 22.950±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DO CIL_0001DO_0002 CGP 2:180024987-180042433
CIL_000134 CIL_000134_0002 CGP 2:180036373-180070201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex
GO:0042802 IEA identical protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370858 PSMA7-005 protein_coding Homo_sapiens 0 497
ENST00000370861 PSMA7-002 protein_coding Homo_sapiens 0 845
ENST00000370873 PSMA7-001 protein_coding Homo_sapiens 0 1020
ENST00000442551 PSMA7-006 protein_coding Homo_sapiens 0 497
ENST00000484488 PSMA7-004 processed_transcript Homo_sapiens 0 529
ENST00000486193 PSMA7-003 processed_transcript Homo_sapiens 0 460

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