C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001DO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149657-ENSG00000101182 CGP 9606 20:62122461-62143440
GeneTranscriptPositionBiotype
ENSG00000149657 (LSM14B)
LSM14B, SCD6 homolog B (S. cerevisiae)
ENST00000279068 (LSM14B-001) 62122507-62135378 protein_coding
ENST00000279069 (LSM14B-002) 62122527-62130605 protein_coding
ENST00000361670 (LSM14B-006) 62123152-62131506 protein_coding
ENST00000370915 (LSM14B-005) 62122461-62128030 protein_coding
ENST00000400318 (LSM14B-003) 62122482-62130666 protein_coding
ENSG00000280448 (AL078633.1)
ENST00000624523 (AL078633.1-201) 62134680-62135089 pseudogene
CIL_0001DO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039108-ENSMUSG00000027566 CGP 10090 2:180024987-180042433
GeneTranscriptPositionBiotype
ENSMUSG00000027566 (Psma7)
proteasome (prosome, macropain) subunit, alpha type 7
ENSMUST00000029082 (Psma7-001) 180036374-180042433 protein_coding
ENSMUST00000126021 (Psma7-002) 180036374-180042395 retained_intron
ENSMUST00000129529 (Psma7-007) 180036373-180037384 retained_intron
ENSMUST00000132431 (Psma7-004) 180038069-180040145 retained_intron
ENSMUST00000135650 (Psma7-006) 180036819-180037488 retained_intron
ENSMUST00000142042 (Psma7-005) 180037634-180038821 retained_intron
ENSMUST00000155898 (Psma7-003) 180039296-180042385 processed_transcript
ENSMUSG00000039108 (Lsm14b)
LSM14 homolog B (SCD6, S. cerevisiae)
ENSMUST00000055485 (Lsm14b-001) 180024987-180035461 protein_coding
ENSMUST00000058764 (Lsm14b-002) 180026398-180035465 protein_coding
ENSMUST00000140257 (Lsm14b-003) 180027909-180033810 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DO_0001ENSG00000149657ENST00000279068ENST00000279069ENST00000361670ENST00000370915ENST00000400318ENSG00000280448ENST00000624523CIL_0001DO_0002ENSMUSG00000027566ENSMUST00000029082ENSMUST00000126021ENSMUST00000129529ENSMUST00000132431ENSMUST00000135650ENSMUST00000142042ENSMUST00000155898ENSMUSG00000039108ENSMUST00000055485ENSMUST00000058764ENSMUST00000140257
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DO_0001ENSG00000149657ENST00000279068ENST00000279069ENST00000361670ENST00000370915ENST00000400318ENSG00000280448ENST00000624523CIL_0001DO_0002ENSMUSG00000027566ENSMUST00000029082ENSMUST00000126021ENSMUST00000132431ENSMUSG00000039108ENSMUST00000055485ENSMUST00000058764ENSMUST00000140257
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149657 ENST00000279068 6.012±0.00 4.973±0.00 1.273±0.00 6.820±3.26 3.556±2.53 3.220±1.94 1.159±0.00 7.322±0.00 4.582±0.00 4.504±1.72 N/A 18.820±18.00 10.033±5.67 34.079±14.68
ENST00000279069 N/A N/A N/A N/A N/A N/A N/A N/A 5.749±0.00 N/A N/A N/A N/A N/A
ENST00000361670 N/A N/A 1.419±0.00 N/A N/A 1.131±0.00 N/A 0.773±0.00 N/A N/A N/A 16.843±0.00 7.509±0.00 41.682±0.00
ENST00000370915 N/A N/A N/A N/A N/A 2.504±0.00 N/A N/A N/A 1.263±0.00 N/A N/A N/A N/A
ENST00000400318 N/A N/A 2.650±0.00 N/A N/A N/A N/A N/A N/A 4.529±0.00 N/A N/A N/A N/A
ENSG00000280448 ENST00000624523 11.348±0.00 11.476±0.00 N/A N/A N/A 17.451±0.00 N/A N/A N/A 6.563±2.13 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027566 ENSMUST00000029082 87.193±7.00 78.159±23.90 97.715±12.97 56.457±22.24 82.288±21.60 89.984±4.64 64.499±10.96 95.854±4.94 119.140±25.67 63.569±5.34 70.497±2.65 145.130±21.06 161.640±49.72 22.950±1.18
ENSMUST00000126021 N/A 9.156±2.51 N/A N/A 9.374±1.02 5.640±0.06 N/A N/A N/A 6.013±0.40 N/A 8.933±2.04 N/A N/A
ENSMUST00000129529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132431 N/A 12.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.809±0.00
ENSMUST00000135650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039108 ENSMUST00000055485 9.635±2.04 9.131±4.68 14.961±0.40 21.909±4.09 6.871±0.87 11.398±2.54 2.775±0.13 9.975±1.17 6.302±1.77 8.522±0.57 3.290±2.45 18.893±7.50 6.017±0.28 10.610±4.71
ENSMUST00000058764 6.354±0.00 6.457±0.58 4.900±0.24 24.577±18.18 3.574±0.87 N/A N/A 2.011±0.27 1.821±0.35 3.494±0.71 6.014±0.00 7.724±2.31 2.429±1.14 3.786±1.18
ENSMUST00000140257 N/A N/A N/A 36.460±0.00 N/A N/A N/A N/A N/A N/A N/A 81.627±0.00 21.243±5.85 59.905±0.00

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