C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin (importin) alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029353 Kpna4-001 ENSMUSG00000027782 10090 - 3:69067149-69127113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029353 6.093±0.79 8.377±1.24 8.337±0.43 6.722±1.46 6.126±2.50 5.160±0.65 3.581±0.22 4.256±0.57 4.420±0.84 7.821±0.60 14.040±0.80 6.268±2.03 9.834±1.85 8.884±2.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZB CIL_0001ZB_0002 CGP 3:69035288-69127113

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0008565 IDA protein transporter activity
GO:0042542 IMP response to hydrogen peroxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000034456 kpna4-001 protein_coding Danio_rerio 0 905
ENSDART00000125797 kpna4-201 protein_coding Danio_rerio 0 893
ENST00000334256 KPNA4-001 protein_coding Homo_sapiens 0 5171
ENST00000396110 RP11-284B18.3-001 processed_pseudogene Homo_sapiens 0 1075
ENST00000402742 RP11-30P6.1-001 unprocessed_pseudogene Homo_sapiens 0 1814
ENST00000468527 KRT8P12-002 processed_transcript Homo_sapiens 1e-32 145
ENST00000469804 KPNA4-002 processed_transcript Homo_sapiens 0 285
ENST00000483437 KPNA4-003 protein_coding Homo_sapiens 0 418

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