C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402742 RP11-30P6.1-001 ENSG00000217060 9606 + 6:85286076-85290849 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMuscleOvaryTestisENST00000402742
Transcript ID Brain Breast Muscle Ovary Testis
ENST00000402742 0.014±0.00 0.007±0.00 0.006±0.00 0.016±0.00 0.025±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K0 CIL_0007K0_0001 UCNEbase 6:84361462-85614404
CIL_00066W CIL_00066W_0001 CGP 6:84687351-85495791
CIL_0008Z8 CIL_0008Z8_0001 VISTA 6:84776801-85379105
CIL_0007RZ CIL_0007RZ_0001 VISTA 6:84788648-85390994
CIL_0007TJ CIL_0007TJ_0001 VISTA 6:84815847-85419694
CIL_0008Z9 CIL_0008Z9_0001 VISTA 6:84885897-85488288
CIL_0007TL CIL_0007TL_0001 VISTA 6:84971170-85574346

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029353 Kpna4-001 protein_coding Mus_musculus 0 1814
ENSMUST00000127497 Kpna4-002 protein_coding Mus_musculus 0 484

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