C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptophysin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029486 Sypl2-201 ENSMUSG00000027887 10090 - 3:108212266-108226599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029486
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029486 0.107±0.05 0.075±0.04 0.263±0.03 0.145±0.00 20.022±16.42 0.292±0.09 0.162±0.04 15.899±0.90 0.046±0.03 1.917±0.08 110.657±14.60 0.052±0.02 0.271±0.14 0.186±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0006874 IMP cellular calcium ion homeostasis
GO:0021762 IEA substantia nigra development
GO:0030285 IBA integral component of synaptic vesicle membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369872 SYPL2-001 protein_coding Homo_sapiens 0 1092
ENST00000475497 SYPL2-002 processed_transcript Homo_sapiens 0 231

Loading