C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptophysin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475497 SYPL2-002 ENSG00000143028 9606 + 1:109475242-109476843 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000475497
Transcript ID Colon Liver
ENST00000475497 0.820±0.00 0.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283
CIL_000735 CIL_000735_0002 CGP 1:109399031-109482137
CIL_000736 CIL_000736_0003 CGP 1:109466628-109492804

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029486 Sypl2-201 protein_coding Mus_musculus 0 231
ENSMUST00000156371 Sypl2-002 protein_coding Mus_musculus 0 231
ENSMUST00000141387 Sypl2-001 protein_coding Mus_musculus 0 231

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