C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 6, apoptosis-related cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265164 CASP6-001 ENSG00000138794 9606 - 4:109688742-109703473 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000265164
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000265164 1.115±0.00 2.377±0.20 2.935±0.35 0.450±0.00 1.328±1.02 1.760±1.14 1.198±0.00 4.158±1.05 2.184±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IEA:IBA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0006508 IEA:IDA proteolysis
GO:0006915 IEA:IBA apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0008234 TAS:IEA cysteine-type peptidase activity
GO:0030855 IEP epithelial cell differentiation
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029626 Casp6-001 protein_coding Mus_musculus 0 806
ENSMUST00000152622 Casp6-003 retained_intron Mus_musculus 0 525
ENSMUST00000137314 Casp6-002 processed_transcript Mus_musculus 0 283
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.000002 58

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