C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 6, apoptosis-related cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000352981 CASP6-002 ENSG00000138794 9606 - 4:109688622-109703419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyMuscleOvaryTestisENST00000352981
Transcript ID Adipose Brain Breast Kidney Muscle Ovary Testis
ENST00000352981 2.769±0.00 0.579±0.00 2.194±0.00 1.108±0.73 0.656±0.00 3.118±2.06 3.057±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IBA:IEA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0006508 IDA:IEA proteolysis
GO:0006915 IBA:IEA apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0008234 TAS:IEA cysteine-type peptidase activity
GO:0030855 IEP epithelial cell differentiation
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152622 Casp6-003 retained_intron Mus_musculus 0 529
ENSMUST00000029626 Casp6-001 protein_coding Mus_musculus 0 525
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.000002 58

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