C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin reductase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030069 Ptgr1-001 ENSMUSG00000028378 10090 - 4:58965439-58987119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030069 2.906±0.97 2.707±0.85 22.275±10.85 0.964±0.57 1.037±0.64 4.752±1.37 0.849±0.35 2.089±0.24 3.167±2.64 6.713±2.07 0.307±0.07 4.359±2.48 6.638±6.32 3.723±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093E CIL_00093E_0002 VISTA 4:58366631-58972430
CIL_0005XH CIL_0005XH_0002 CGP 4:58943628-58987119

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006693 IEA prostaglandin metabolic process
GO:0008270 IEA zinc ion binding
GO:0009636 IEA response to toxic substance
GO:0032440 IEA 2-alkenal reductase [NAD(P)] activity
GO:0036132 IEA 13-prostaglandin reductase activity
GO:0047522 IEA 15-oxoprostaglandin 13-oxidase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309195 PTGR1-001 protein_coding Homo_sapiens 0 928
ENST00000374324 PTGR1-004 nonsense_mediated_decay Homo_sapiens 0 627
ENST00000407693 PTGR1-201 protein_coding Homo_sapiens 0 928
ENST00000466771 PTGR1-006 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000538962 PTGR1-202 protein_coding Homo_sapiens 0 806

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